data/varscan-2.4.3+dfsg/sf/varscan/Copynumber.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/ProcessSomatic.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/Comparison.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/Somatic.java: Variant Call Format (VCF) version 4.1";, ASCII text, with very long lines data/varscan-2.4.3+dfsg/sf/varscan/Coverage.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/FpFilter.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/FilterSomatic.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/FishersExact.java: ASCII text data/varscan-2.4.3+dfsg/sf/varscan/CopyCaller.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/ReadCounts.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/CallMpileup.java: Variant Call Format (VCF) version 4.1";, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/CallPileup.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/FilterVariants.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/Trio.java: Variant Call Format (VCF) version 4.1";, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/LimitVariants.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/SmartFileReader.java: Java source, ASCII text data/varscan-2.4.3+dfsg/sf/varscan/VarScan.java: C source, ASCII text data/varscan-2.4.3+dfsg/debian/README.source: ASCII text data/varscan-2.4.3+dfsg/debian/bin/varscan: Bourne-Again shell script, ASCII text executable data/varscan-2.4.3+dfsg/debian/build.xml: XML document, ASCII text data/varscan-2.4.3+dfsg/debian/changelog: ASCII text data/varscan-2.4.3+dfsg/debian/compat: ASCII text data/varscan-2.4.3+dfsg/debian/control: ASCII text data/varscan-2.4.3+dfsg/debian/copyright: UTF-8 Unicode text data/varscan-2.4.3+dfsg/debian/createmanpages: POSIX shell script, ASCII text executable data/varscan-2.4.3+dfsg/debian/docs: ASCII text data/varscan-2.4.3+dfsg/debian/faq.txt: UTF-8 Unicode text data/varscan-2.4.3+dfsg/debian/get-manual: POSIX shell script, ASCII text executable data/varscan-2.4.3+dfsg/debian/install: ASCII text data/varscan-2.4.3+dfsg/debian/jlibs: ASCII text data/varscan-2.4.3+dfsg/debian/manpages: ASCII text data/varscan-2.4.3+dfsg/debian/release-notes.txt: ASCII text data/varscan-2.4.3+dfsg/debian/rules: a /usr/bin/make -f script, ASCII text executable data/varscan-2.4.3+dfsg/debian/source/format: ASCII text data/varscan-2.4.3+dfsg/debian/upstream/metadata: ASCII text data/varscan-2.4.3+dfsg/debian/using-varscan.txt: UTF-8 Unicode text data/varscan-2.4.3+dfsg/debian/varscan.1: troff or preprocessor input, ASCII text data/varscan-2.4.3+dfsg/debian/watch: ASCII text data/varscan-2.4.3+dfsg/.pc/.version: ASCII text data/varscan-2.4.3+dfsg/.pc/.quilt_patches: ASCII text data/varscan-2.4.3+dfsg/.pc/.quilt_series: ASCII text data/varscan-2.4.3+dfsg/.pc/applied-patches: empty