data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/BaseCallerUtils.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/DPTreephaser.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/DPTreephaser.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/PIDloop.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/PIDloop.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/TreephaserSSE.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/BaseCaller/TreephaserSSE.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Calibration/CalibrationHelper.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Calibration/FlowAlignment.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Calibration/FlowAlignment.h: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Calibration/LinearCalibrationModel.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Calibration/LinearCalibrationModel.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/IonVersion.cpp.in: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/IonVersion.h: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/LICENSE: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/README.md: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/README.txt: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/RandSchrange.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/SystemMagicDefines.h: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Util/OptArgs.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Util/OptArgs.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Util/Utils.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/Util/Utils.cpp: C++ source, ASCII text 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data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/BiasGenerator.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/BiasGenerator.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/CrossHypotheses.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/CrossHypotheses.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/DiagnosticJSON.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/DiagnosticJson.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/PosteriorInference.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/PosteriorInference.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/EnsembleEval/ShortStack.cpp: C source, ASCII text 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ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/prepare_hotspots.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/tvcutils.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/tvcutils.h: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/unify_vcf.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/unify_vcf.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/validate_bed.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/viterbi.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/tvcutils/viterbi.hpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/VariantCaller/BAMWalkerEngine.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/bin/variant_caller_pipeline.py: Python script, ASCII text executable, with very long lines data/tvc-5.0.3+git20151221.80e144e+dfsg/external/freebayes/LICENSE: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/freebayes/README: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/freebayes/src/AlleleParser.cpp: C source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/freebayes/src/AlleleParser.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/freebayes/src/Version.h: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/vcflib/BedReader.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/vcflib/LICENSE: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/vcflib/README: ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/vcflib/Variant.cpp: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/vcflib/Variant.h: C++ source, ASCII text data/tvc-5.0.3+git20151221.80e144e+dfsg/external/vcflib/convert.h: C++ source, ASCII 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