data/profphd-1.0.42/src/prof/bin/__DO_NOT_USE_THIS_DIR__: empty data/profphd-1.0.42/src/prof/embl/mat/Doc-phd-code.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/mat/Maxhom_Blosum.metric: ASCII text data/profphd-1.0.42/src/prof/embl/mat/Maxhom_GCG.metric: ASCII text data/profphd-1.0.42/src/prof/embl/mat/Maxhom_McLachlan.metric: ASCII text data/profphd-1.0.42/src/prof/embl/mat/Maxhom_Sec_Struc.metric: ASCII text data/profphd-1.0.42/src/prof/embl/mat/Maxhom_Struc_IO.metric: ASCII text data/profphd-1.0.42/src/prof/embl/mat/__THESE_METRIC_FILES_ARE_IDENTICAL_TO_THOSE_IN_PROF-MAT__: empty data/profphd-1.0.42/src/prof/embl/mat/abbrPhd3.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/abbrPhdAcc.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/abbrPhdBoth.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/abbrPhdHtm.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/abbrPhdRdb3.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/abbrPhdSec.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/headPhd3.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/headPhdAcc.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/headPhdBoth.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/headPhdConcise.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/headPhdHtm.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/headPhdSec.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/help-manual.txt: ASCII text data/profphd-1.0.42/src/prof/embl/mat/help-options.txt: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152f-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152f-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152f-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152g-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152g-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152a-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152g-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152a-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152b-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-w9-15rcc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152a-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152a-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152a-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152c-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152b-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152b-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152d-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152d-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152b-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152e-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152e-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152e-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152e-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152f-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Exp152g-w9-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152b-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152c-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152c-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152c-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152c-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152d-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/F152d-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152d-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69b-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69c-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152e-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69c-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69d-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152f-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15p-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15pc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15pc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69d-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15pcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15r-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15rc-15pc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15rc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/S152g-15rcc-15pcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69a-pccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69a-pccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69a-rccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69a-rccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69b-pccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69b-pccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69b-rccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69b-rccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69c-pccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69c-pccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69c-rccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69c-rccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69d-pccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69d-pccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69d-rccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Stm69d-rccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69a-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69a-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/cross/Tm69b-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-15rc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-15rcc.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-rccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-w9-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Stm69x-pccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp152x-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Stm69x-pccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-15rccld-A1.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-15rcic-A1.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Stm69x-rccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-15rcicld-A1.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Stm69x-rccld-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-w9-15rccld-A1.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Tm69x-rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Tm69x-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-w9-15rcicld-A1.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp252x-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp317x-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp317x-15rcic.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp317x-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp317x-w9-15rccld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/Exp317x-w9-15rcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/F252x-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/F252x-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/F317x-pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/F317x-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-pc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-pc-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-pcc-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-pccld-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-pccld-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-rc-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-rc-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-rcc-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-rccld-15pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S252x-rccld-15pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-pc-pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-pc-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-pcc-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-pccld-pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-pccld-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-rc-pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-rc-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-rcc-pcicld.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/net/S317x-rccld-pci.DAT: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152a-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152b-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152c-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152d-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152e-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152f-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152g-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List152x-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List252x-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List317x-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List69a-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List69b-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List69c-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List69d-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/List69x-train: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152a.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152b.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152c.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152d.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152e.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152f.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-cic-152g.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152a.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152b.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152c.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152d.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152e.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152f.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152g.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp-152n.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-exp317-may94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-htm69-aug94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-htm69a.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-htm69b.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-htm69c.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-htm69d.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/Para-sec317-may94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/list_trainlists_all: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/list_trainlists_htm: ASCII text data/profphd-1.0.42/src/prof/embl/para/cross/list_trainlists_secacc: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-exp152x-mar94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-exp252-apr94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-exp317-apr94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-exp450-oct94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-exptest.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-exptmp.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-htm69-aug94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-htmtest.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-magma.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-sec317-may94.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-test.com: ASCII text data/profphd-1.0.42/src/prof/embl/para/Para-tmp.com: ASCII text data/profphd-1.0.42/src/prof/embl/scr/lib/cgi-lib.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/comp.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/ctime.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/hssp_new.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/molbio.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/prot.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/sys.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/all5.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/br.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/file.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/formats.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/hssp.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib/scr.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pack/phd_htmfil.pm: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pack/phd_htmref.pm: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pack/phd_htmtop.pm: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pack/copf.pm: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pack/hssp_filter.pm: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2ascii.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2casp2.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2casp4.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2dssp.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2html.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2html2000.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2msf.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_rdb2pred.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/ctime.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib-phd.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib-phdhtml.pm: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pdbid_sort.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/phd-mergeRdbSecAcc.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/phd_htmfil.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/phd_htmref.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/phd_htmtop.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/pvmgetarch.sh: POSIX shell script, ASCII text executable data/profphd-1.0.42/src/prof/embl/scr/rdb_tokg.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/test-install.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/tlphd-add-nali2rdb.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/lib-col.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/scr/conv_phd2hssp.pl: Perl script text executable data/profphd-1.0.42/src/prof/embl/phd.pl: Perl script text executable data/profphd-1.0.42/src/prof/exa/1ppt.f: ASCII text data/profphd-1.0.42/src/prof/exa/1ppt.f.rdbProf: ASCII text data/profphd-1.0.42/src/prof/exa/1ppt.hssp: ASCII text data/profphd-1.0.42/src/prof/exa/1ppt.hssp.prof: ASCII text data/profphd-1.0.42/src/prof/exa/1ppt.phdNotHtm: ASCII text data/profphd-1.0.42/src/prof/exa/1ppt.phdPred: ASCII text data/profphd-1.0.42/src/prof/exa/1ppt.phdRdb: ASCII text data/profphd-1.0.42/src/prof/exa/256b.dssp: diff output, ASCII text data/profphd-1.0.42/src/prof/exa/2ppt.fastamul: ASCII text data/profphd-1.0.42/src/prof/exa/2ppt.profSec: ASCII text data/profphd-1.0.42/src/prof/exa/2ppt.rdbProf: ASCII text data/profphd-1.0.42/src/prof/exa/2ppt.rdbProfSec: ASCII text data/profphd-1.0.42/src/prof/exa/3ppt.gcg: ASCII text data/profphd-1.0.42/src/prof/exa/8rnt.msf: ASCII text data/profphd-1.0.42/src/prof/exa/8rnt.profSec: ASCII text data/profphd-1.0.42/src/prof/exa/8rnt.rdbProfSec: ASCII text data/profphd-1.0.42/src/prof/exa/8rntSec.prof: ASCII text data/profphd-1.0.42/src/prof/exa/8rnt_prof.html: HTML document, ASCII text, with very long lines data/profphd-1.0.42/src/prof/exa/9rnt.profSec: ASCII text data/profphd-1.0.42/src/prof/exa/9rnt.rdbProfSec: ASCII text data/profphd-1.0.42/src/prof/exa/9rnt.saf: ASCII text data/profphd-1.0.42/src/prof/exa/PSA2_HUMAN.safFil: ASCII text data/profphd-1.0.42/src/prof/exa/ReadMe: ASCII text data/profphd-1.0.42/src/prof/exa/paho_chick: ASCII text data/profphd-1.0.42/src/prof/exa/paho_chick.f: ASCII text data/profphd-1.0.42/src/prof/exa/paho_chick.profSec: ASCII text data/profphd-1.0.42/src/prof/exa/paho_chick.rdbProfSec: ASCII text data/profphd-1.0.42/src/prof/exa/tsnap_query.fasta: ASCII text data/profphd-1.0.42/src/prof/exa/tsnap_query.rdbProf.goldstandard_yachdav_SNAP_prof: ASCII text data/profphd-1.0.42/src/prof/mat/Blast_blosum62.metric: ASCII text data/profphd-1.0.42/src/prof/mat/DOTncbirc: ASCII text data/profphd-1.0.42/src/prof/mat/Maxhom_Blosum.metric: ASCII text data/profphd-1.0.42/src/prof/mat/Maxhom_GCG.metric: ASCII text data/profphd-1.0.42/src/prof/mat/Maxhom_McLachlan.metric: ASCII text data/profphd-1.0.42/src/prof/mat/Maxhom_Sec_Struc.metric: ASCII text data/profphd-1.0.42/src/prof/mat/Maxhom_Struc_IO.metric: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp1_13ball.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp1_13bsumh.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp1_13uall.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp1_13usumh.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp3_13ball.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp3_13bsumh.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp3_13uall.jct: ASCII text data/profphd-1.0.42/src/prof/net/ACChssp3_13usumh.jct: ASCII text data/profphd-1.0.42/src/prof/net/HTMhssp1_21ball.jct: ASCII text data/profphd-1.0.42/src/prof/net/HTMhssp1_21uall.jct: ASCII text data/profphd-1.0.42/src/prof/net/PROFacc_best.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFacc_fast.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFacc_good.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFacc_tst.jct: ASCII text data/profphd-1.0.42/src/prof/net/PROFboth_best.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFboth_fast.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFboth_good.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFboth_tst.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFsec_best.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFsec_fast.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFsec_good.par: ASCII text data/profphd-1.0.42/src/prof/net/PROFsec_tst.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp1_17ball.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp1_17uall.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp1_21ball.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp1_21uall.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17bball.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17bball.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17buall.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17buall.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17uball.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17uball.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17uuall.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_17uuall.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21bball.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21bball.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21buall.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21buall.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21uball.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21uball.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21uuall.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp2_21uuall.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp3_17b.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp3_17u.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp3_21b.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp3_21b.par: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp3_21u.jct: ASCII text data/profphd-1.0.42/src/prof/net/SEChssp3_21u.par: ASCII text data/profphd-1.0.42/src/prof/scr/lib/dead_code_tmp.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/lib/lib-proferr.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/lib/lib-profhtml.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/lib/prof.pm: Perl5 module source, ASCII text data/profphd-1.0.42/src/prof/scr/lib/dead_code.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/lib/lib-col.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/lib/lib-prof.pl: ASCII text data/profphd-1.0.42/src/prof/scr/lib/lib-profwrt.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/pack/tlprof_htmfil.pm: Perl script text executable data/profphd-1.0.42/src/prof/scr/pack/tlprof_htmref.pm: Perl script text executable data/profphd-1.0.42/src/prof/scr/pack/tlprof_htmtop.pm: Perl script text executable data/profphd-1.0.42/src/prof/scr/CONFprof.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/conv_prof.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/prof.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/pvmgetarch.sh: POSIX shell script, ASCII text executable data/profphd-1.0.42/src/prof/scr/test-install.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/tlprof_blastmat2hssp.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/tlprof_htmfil.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/tlprof_htmref.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/tlprof_htmtop.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/tlprof_jury.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/tlprof_ri-sigma.pl: Perl script text executable data/profphd-1.0.42/src/prof/scr/conv_prof2hssp.pl: Perl script text executable data/profphd-1.0.42/src/prof/Makefile: makefile script, ASCII text data/profphd-1.0.42/src/prof/prof.pl: Perl script text executable data/profphd-1.0.42/src/prof/profconv: Perl script text executable data/profphd-1.0.42/src/prof/prof: Bourne-Again shell script, ASCII text executable data/profphd-1.0.42/AUTHORS: ASCII text data/profphd-1.0.42/COPYING: ASCII text data/profphd-1.0.42/ChangeLog: ASCII text data/profphd-1.0.42/INSTALL: ASCII text data/profphd-1.0.42/Makefile: makefile script, ASCII text data/profphd-1.0.42/README: data data/profphd-1.0.42/profphd.spec: ASCII text data/profphd-1.0.42/debian/README.Debian: ASCII text data/profphd-1.0.42/debian/changelog: ASCII text data/profphd-1.0.42/debian/compat: ASCII text data/profphd-1.0.42/debian/control: ASCII text data/profphd-1.0.42/debian/copyright: ASCII text data/profphd-1.0.42/debian/docs: ASCII text data/profphd-1.0.42/debian/patches/1_remove_defined_array.patch: unified diff output, ASCII text data/profphd-1.0.42/debian/patches/2_remove_perlbrew_usage.patch: unified diff output, ASCII text data/profphd-1.0.42/debian/patches/3_fix_indexing.patch: unified diff output, ASCII text data/profphd-1.0.42/debian/patches/4_fix_negative_repeat_count.patch: unified diff output, ASCII text data/profphd-1.0.42/debian/patches/5_fix_regex_warning.patch: unified diff output, ASCII text data/profphd-1.0.42/debian/patches/series: ASCII text data/profphd-1.0.42/debian/rules: a /usr/bin/make -f script, ASCII text executable data/profphd-1.0.42/debian/source/format: ASCII text data/profphd-1.0.42/debian/tests/control: ASCII text data/profphd-1.0.42/debian/tests/installation-test: POSIX shell script, ASCII text executable data/profphd-1.0.42/debian/tests/profphd-install-test: POSIX shell script, ASCII text executable data/profphd-1.0.42/debian/upstream/metadata: ASCII text data/profphd-1.0.42/debian/watch: ASCII text data/profphd-1.0.42/.pc/.version: ASCII text data/profphd-1.0.42/.pc/.quilt_patches: ASCII text data/profphd-1.0.42/.pc/.quilt_series: ASCII text data/profphd-1.0.42/.pc/applied-patches: ASCII text data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib-col.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/conv_phd2hssp.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib/all5.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib/br.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib/file.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib/formats.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib/hssp.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/lib/scr.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/pack/copf.pm: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/embl/scr/pack/hssp_filter.pm: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/scr/conv_prof2hssp.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/scr/lib/dead_code.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/scr/lib/lib-col.pl: Perl script text executable data/profphd-1.0.42/.pc/1_remove_defined_array.patch/src/prof/scr/lib/lib-prof.pl: ASCII text data/profphd-1.0.42/.pc/2_remove_perlbrew_usage.patch/src/prof/prof: Bourne-Again shell script, ASCII text executable data/profphd-1.0.42/.pc/3_fix_indexing.patch/src/prof/scr/lib/lib-prof.pl: ASCII text data/profphd-1.0.42/.pc/4_fix_negative_repeat_count.patch/src/prof/scr/lib/lib-prof.pl: ASCII text data/profphd-1.0.42/.pc/5_fix_regex_warning.patch/src/prof/scr/lib/lib-profwrt.pl: Perl script text executable