data/openms-2.5.0+cleaned1/README.md: HTML document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/AUTHORS: UTF-8 Unicode (with BOM) text data/openms-2.5.0+cleaned1/doc/code_examples/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Enzyme.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Unlabeled.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_FileIO_mzML.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MSChromatogram.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_EmpiricalFormula.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Test.cpp: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Logger.cpp: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_GUI_ParamEditor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Precursor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_SavitzkyGolayFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_GaussFilter.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_Unlabeled_1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_TOFCalibration_raw.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_MapAlignment_2.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_FileIO_indexed.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_MapAlignment_1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_Unlabeled_2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_TOFCalibration_peak.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_ParamEditor.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_FileIO.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_Labeled.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_TOFCalibration_masses.txt: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_Spectrum1D.dta: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_SavitzkyGolayFilter.dta: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_MorphologicalFilter.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/code_examples/data/Tutorial_PeakPickerCWT.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/code_examples/data/.gitattributes: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_ResidueModification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Clustering.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_typeAsString.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_IdentificationClasses.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_PeakIntensityPredictor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_GaussFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MapAlignment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_FeatureFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_DPosition.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Labeled.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/output/README: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_TOFCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_AASequence.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_ComparatorUtils.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Template.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_FeatureMap.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/executables.cmake: ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_GUI_Spectrum1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MorphologicalFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_TheoreticalSpectrumGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MSSpectrum.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MetaInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_RangeManager.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_GUI_ListEditor.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Final.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MRMTransitionGroup.cpp: UTF-8 Unicode text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_MSExperiment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_DRange.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_PeakPickerCWT.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_FileIO.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_FileIO_Consumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Element.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Residue.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/code_examples/Tutorial_Param.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/OpenMS_Tutorial_html.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/UTILS.doxygen: exported SGML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/Main.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/FAQ.doxygen: ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/doxygen/public/TOPPAS.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/ExternalCode.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/Modules.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/Changelog.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/QuickStart.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/TOPP.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/PyOpenMS.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/TOPP_Tutorial_html.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/public/KnownDevBugs.doxygen: ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/doxygen/images/MultiGradientSelector.png: PNG image data, 255 x 43, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/ColorSelector.png: PNG image data, 158 x 77, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/Spectrum1DWidget.png: PNG image data, 511 x 399, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/MetaDataBrowser.png: PNG image data, 851 x 352, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_BSA_Quantitation.png: PNG image data, 728 x 347, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_example_profile_data_processing.png: PNG image data, 977 x 148, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_BSA_results_3d.png: PNG image data, 687 x 717, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_simple_example.png: PNG image data, 1200 x 675, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_parameters.png: PNG image data, 1553 x 787, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/AxisWidget.png: PNG image data, 437 x 29, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/SimpleExtender.png: PNG image data, 1020 x 352, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/SaveImageDialog.png: PNG image data, 373 x 153, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/SimplePairFinder.png: PNG image data, 602 x 213, 8-bit colormap, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/Spectrum2DCanvas.png: PNG image data, 397 x 358, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_example_merger.png: PNG image data, 912 x 491, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/INIFileEditor.png: PNG image data, 616 x 638, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_BSA_results_2d.png: PNG image data, 645 x 693, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/MorphologicalFilter_tophat.png: PNG image data, 1000 x 400, 8-bit colormap, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_run_options.png: PNG image data, 796 x 422, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_edges.png: PNG image data, 1447 x 614, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPAS_Ecoli_Identification.png: PNG image data, 900 x 538, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/Spectrum2DWidget.png: PNG image data, 460 x 402, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/ParamEditor.png: PNG image data, 491 x 390, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/Spectrum3DWidget.png: PNG image data, 434 x 354, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/MorphologicalFilter_all.png: PNG image data, 1000 x 400, 8-bit colormap, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/HistogramWidget.png: PNG image data, 556 x 435, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/Spectrum1DCanvas.png: PNG image data, 462 x 353, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/TOPPView.png: PNG image data, 1200 x 737, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/images/SILACAnalyzer_algorithm.png: PNG image data, 625 x 635, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/Doxyfile_internal.in: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/Doxyfile_xml.in: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/Doxyfile.in: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/install/install-win-bin.doxygen: HTML document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/doxygen/install/install-win.doxygen: HTML document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/doxygen/install/install-linux.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/install/install-macs-bin.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/install/common-cmake-parameters.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/install/install-macs.doxygen: HTML document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/doc/doxygen/install/install-linux-bin.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/Doxyfile_noclass.in: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/Doxyfile_dot.in: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/common/OpenMS_75x55_transparent.png: PNG image data, 75 x 55, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/doxygen/common/header.html: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/common/style_ini.css: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/doxygen/common/customdoxygen.css: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/common/favicon.ico: MS Windows icon resource - 1 icon, 16x16, 32 bits/pixel data/openms-2.5.0+cleaned1/doc/doxygen/common/footer.html: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/parameters/TOPPDocumenter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/parameters/executables.cmake: ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/parameters/DefaultParamHandlerDocumenter.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/doc/doxygen/dot: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/refman_overwrite.tex.in: LaTeX 2e document, ASCII text data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/MetaInfo.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/SpectrumSettings.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/RawPeakFeatureMap.png: PNG image data, 322 x 471, 8-bit grayscale, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/Terms_Spectrum.png: PNG image data, 709 x 395, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/ExperimentalSettings.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/MetaInfo.png: PNG image data, 345 x 280, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/Kernel_DataPoints.png: PNG image data, 788 x 146, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/ExperimentalSettings.png: PNG image data, 560 x 388, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/Kernel.png: PNG image data, 710 x 230, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/Kernel.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/Terms_Map.png: PNG image data, 889 x 530, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/SpectrumSettings.png: PNG image data, 532 x 341, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/images/OpenMS_overview.png: PNG image data, 2913 x 1034, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/Doxyfile.in: ASCII text data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial/OpenMS_Tutorial.doxygen: UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/doc/index.html: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial.pdf: PDF document, version 1.5 data/openms-2.5.0+cleaned1/doc/OpenMS_tutorial.pdf: PDF document, version 1.5 data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/refman_overwrite.tex.in: LaTeX 2e document, ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools.png: PNG image data, 560 x 598, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_noisefilter.png: PNG image data, 850 x 622, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_qualitycontrol.png: PNG image data, 510 x 489, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_consensus_id.png: PNG image data, 1213 x 202, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_alignment.png: PNG image data, 577 x 235, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_raw_data.png: PNG image data, 531 x 233, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_pp_peakwidth.png: PNG image data, 850 x 607, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_consensus_id.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_menu.png: PNG image data, 253 x 161, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_raw_data.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_help.png: PNG image data, 717 x 226, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_parts.png: PNG image data, 758 x 665, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_labeled_quant.png: PNG image data, 891 x 82, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_ff_centroided.png: PNG image data, 877 x 637, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_baseline.png: PNG image data, 850 x 615, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_labeled_quant.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_noisefilter_filtered.png: PNG image data, 850 x 657, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_labelfree_quant.png: PNG image data, 951 x 232, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_icons.png: PNG image data, 593 x 104, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_baseline_filtered.png: PNG image data, 850 x 659, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_labelfree_quant.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_1D.png: PNG image data, 696 x 588, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_tools_pp_picked.png: PNG image data, 1400 x 996, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPP_alignment.graphml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/images/TOPPView_statistics.png: PNG image data, 615 x 351, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/Doxyfile.in: ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/TOPP_concepts.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/TOPPView_interface.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/TOPPView_calling_topp.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/TOPP_scripting.doxygen: HTML document, ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/TOPPAS.doxygen: ASCII text data/openms-2.5.0+cleaned1/doc/TOPP_tutorial/TOPP_advanced.doxygen: ASCII text data/openms-2.5.0+cleaned1/cmake/README.md: ASCII text data/openms-2.5.0+cleaned1/cmake/package_definitions.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/OpenMSConfig.cmake.in: ASCII text data/openms-2.5.0+cleaned1/cmake/empty.depend.in: empty data/openms-2.5.0+cleaned1/cmake/export_macros.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/Coverage.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/OpenMSPackageResourceWelcomeFile.txt: ASCII text data/openms-2.5.0+cleaned1/cmake/package_components.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/Windows/AdvUninstLog2.nsh: ASCII text data/openms-2.5.0+cleaned1/cmake/Windows/images/example_header.png: PNG image data, 513 x 399, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/cmake/Windows/images/example_wizard.png: PNG image data, 513 x 399, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/cmake/Windows/images/wizard-uninstall.bmp: PC bitmap, Windows 3.x format, 164 x 314 x 8, image size 51498, resolution 2834 x 2834 px/m, cbSize 52576, bits offset 1078 data/openms-2.5.0+cleaned1/cmake/Windows/images/header.bmp: PC bitmap, Windows 3.x format, 150 x 57 x 8, image size 8666, resolution 2834 x 2834 px/m, cbSize 9744, bits offset 1078 data/openms-2.5.0+cleaned1/cmake/Windows/images/header-uninstall.bmp: PC bitmap, Windows 3.x format, 150 x 57 x 8, image size 8666, resolution 2834 x 2834 px/m, cbSize 9744, bits offset 1078 data/openms-2.5.0+cleaned1/cmake/Windows/images/wizard.bmp: PC bitmap, Windows 3.x format, 164 x 314 x 8, image size 51498, resolution 2834 x 2834 px/m, cbSize 52576, bits offset 1078 data/openms-2.5.0+cleaned1/cmake/Windows/images/OpenMS_splash.bmp: PC bitmap, Windows 3.x format, 180 x 131 x 32, resolution 23622 x 23622 px/m, cbSize 94374, bits offset 54 data/openms-2.5.0+cleaned1/cmake/Windows/NSIS_Readme.txt: ASCII text data/openms-2.5.0+cleaned1/cmake/Windows/Include/AdvUninstLog.nsh: ASCII text data/openms-2.5.0+cleaned1/cmake/Windows/UAC_License.txt: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/OpenMS_TOPPView.ico: MS Windows icon resource - 12 icons, 16x16, 16 colors, 4 bits/pixel, 16x16, 8 bits/pixel data/openms-2.5.0+cleaned1/cmake/Windows/OpenMS.ico: MS Windows icon resource - 12 icons, 16x16, 16 colors, 4 bits/pixel, 16x16, 8 bits/pixel data/openms-2.5.0+cleaned1/cmake/Windows/IncludeScript_FileLogging.nsh: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/NSIS.template.in: UTF-8 Unicode text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/LogicLib.nsh: ASCII text data/openms-2.5.0+cleaned1/cmake/Windows/Docs/Inetc/wiki.txt: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Docs/Inetc/Readme.htm: HTML document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Docs/Advanced: cannot open `data/openms-2.5.0+cleaned1/cmake/Windows/Docs/Advanced' (No such file or directory) Uninstall: cannot open `Uninstall' (No such file or directory) Log/Readme.txt: cannot open `Log/Readme.txt' (No such file or directory) data/openms-2.5.0+cleaned1/cmake/Windows/ReleaseNotes.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Cfg_Settings.nsh.in: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/IncludeScript_Misc.nsh: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/UAC.nsh: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/OpenMS_TOPPAS.ico: MS Windows icon resource - 12 icons, 16x16, 32 bits/pixel, 16x16, 8 bits/pixel data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/recursive.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/put.php: PHP script, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/headers.php: PHP script, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/https.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/redirect.php: PHP script, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/head.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/timeout.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/tostack.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/ftp_auth.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/Example.nsi: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/redirect.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/inetc_local.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/post.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/post.php: HTML document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/post_file.php: PHP script, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/headers.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/post_form.html: HTML document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/post_file.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/translate.nsi: ISO-8859 text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/auth_dlg.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Inetc/put.nsi: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Advanced: cannot open `data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Advanced' (No such file or directory) Uninstall: cannot open `Uninstall' (No such file or directory) Log/Uninstall_Log_Modern_UI.nsi: cannot open `Log/Uninstall_Log_Modern_UI.nsi' (No such file or directory) data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Advanced: cannot open `data/openms-2.5.0+cleaned1/cmake/Windows/Examples/Advanced' (No such file or directory) Uninstall: cannot open `Uninstall' (No such file or directory) Log/Uninstall_Log_Default_UI.nsi: cannot open `Log/Uninstall_Log_Default_UI.nsi' (No such file or directory) data/openms-2.5.0+cleaned1/cmake/Windows/EnvVarUpdate.nsh: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/inetc.vcxproj.filters: XML 1.0 document, UTF-8 Unicode (with BOM) text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/api.h: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/inetc.rc: C source, ISO-8859 text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/inetc.vcxproj: XML 1.0 document, UTF-8 Unicode (with BOM) text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/crt.cpp: C source, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/nsis_tchar.h: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/inetc.sln: UTF-8 Unicode (with BOM) text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/inetc.cpp: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/pluginapi.h: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/resource.h: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/pluginapi.c: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/Windows/Contrib/Inetc/afxres.h: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/package_dragndrop_dmg.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/OpenMSPackageDescriptionFile.txt: ASCII text data/openms-2.5.0+cleaned1/cmake/messages.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/multithreading.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/OpenMSConfigVersion.cmake.in: ASCII text data/openms-2.5.0+cleaned1/cmake/doc_macros.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/package_nsis.cmake: UTF-8 Unicode text data/openms-2.5.0+cleaned1/cmake/install_macros.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindBZip2.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/Findcppcheck.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindCOIN.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/CodeCoverage.cmake: UTF-8 Unicode text data/openms-2.5.0+cleaned1/cmake/modules/LibFindMacros.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindGLPK.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindWM5.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindLATEX.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/GetGitRevisionDescription.cmake.in: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindEigen3.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindZLIB.cmake: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/cmake/modules/FindSQLITE.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/GetGitRevisionDescription.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindXercesC.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/CppcheckTargets.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindSEQAN.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/CheckLibArchitecture.cmake: ASCII text, with very long lines data/openms-2.5.0+cleaned1/cmake/modules/SelectLibraryConfigurations.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/Findcppcheck.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/cmake/modules/FindLIBSVM.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/modules/cotire.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime_package_support.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/build_system_macros.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/package_rpm.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/setup_lib_find_paths.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/AddressSanitizer.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/icons/category.png: PNG image data, 16 x 16, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/cmake/knime/icons/splash.png: PNG image data, 50 x 50, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/cmake/knime/mime.types: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/mimetypes.xml: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/DESCRIPTION: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/configure_plugin_properties.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/binaries_win.ini: ASCII text, with very long lines data/openms-2.5.0+cleaned1/cmake/knime/knime_copy_deps.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/compress_payload.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/common.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/copy_binaries_ini.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/binaries_lnx.ini: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/remove_parameter_from_ctd.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/COPYRIGHT: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/copy_share.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/binaries_mac.ini: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/plugin.properties.in: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/LICENSE: ASCII text data/openms-2.5.0+cleaned1/cmake/knime/find_qt_libs.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/cmake/knime/copy_searchengines.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/MacOSX/background.png: PNG image data, 662 x 585, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/cmake/MacOSX/setup_applescript.scpt.in: ASCII text data/openms-2.5.0+cleaned1/cmake/MacOSX/background.odg: OpenDocument Drawing data/openms-2.5.0+cleaned1/cmake/MacOSX/DS_store: Apple Desktop Services Store data/openms-2.5.0+cleaned1/cmake/MacOSX/README: ASCII text data/openms-2.5.0+cleaned1/cmake/MacOSX/DS_store_new: Apple Desktop Services Store data/openms-2.5.0+cleaned1/cmake/MacOSX/TOPP-shell.command: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/cmake/MacOSX/fix_dependencies.rb: Ruby script, ASCII text data/openms-2.5.0+cleaned1/cmake/MacOSX/fixdmg.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/cmake/MacOSX/notarize_app.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/cmake/MacOSX/openms_logo_large_transparent.png: PNG image data, 400 x 400, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/cmake/MacOSX/TOPP_bash_profile: ASCII text data/openms-2.5.0+cleaned1/cmake/MacOSX/sign_bins_and_libs.rb: Ruby script, ASCII text data/openms-2.5.0+cleaned1/cmake/package_general.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/OpenMSPackageResourceReadme.txt: ASCII text data/openms-2.5.0+cleaned1/cmake/compiler_flags.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/package_deb.cmake: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/cmake/stl_debug.cmake: ASCII text data/openms-2.5.0+cleaned1/cmake/add_library_macros.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/UTILS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/Macros.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataFrameWriter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SwathMap.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/DataStructures.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ITransition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/MockObjects.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/TransitionHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/Transitions.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/MRMScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/StatsHelpers.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/include/OpenMS/OPENSWATHALGO/ALGO/Scoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/README.md: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/MIToolbox.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/RenyiEntropy.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/RenyiMutualInformation.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/ArrayOperations.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/WeightedEntropy.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/WeightedMutualInformation.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/MutualInformation.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/CalculateProbability.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/include/MIToolbox/Entropy.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/WeightedMutualInformation.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/RenyiMutualInformation.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/ArrayOperations.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/MutualInformation.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/RenyiEntropy.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/CalculateProbability.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/Entropy.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/src/WeightedEntropy.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/test/testMIToolbox.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/RenyiMIToolbox.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/joint.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/RenyiMIToolboxMex.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/WeightedMIToolboxMex.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/MIToolbox.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/MIToolboxMex.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/h.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/CompileMIToolbox.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/WeightedMIToolbox.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/condh.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/IAMB.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/CMIM.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/CMIM_Mex.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/DISR.m: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/DISR_Mex.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/CompileDemos.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/mRMR_D.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/demonstration_algorithms/mRMR_D_Mex.c: C source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/mi.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/matlab/cmi.m: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/LICENSE: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/thirdparty/MIToolbox/.gitignore: ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/CMakeLists.txt: UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/OpenSwathAlgoFiles.cmake: UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/MockObjects.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/DataFrameWriter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SpectrumHelpers.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/SwathMap.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/TransitionHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/DATAACCESS/Transitions.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/StatsHelpers.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/MRMScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openswathalgo/source/OPENSWATHALGO/ALGO/Scoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/openms_package_version.h.in: C source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/config.h.in: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/INTERFACES/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/INTERFACES/DataStructures.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/INTERFACES/IMSDataConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/INTERFACES/ISpectrumAccess.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/TransformationXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SequestOutfile.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotGenericFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/PeakFileOptions.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/sources.cmake: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/OPTIONS/FeatureFileOptions.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTab.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/OMSSACSVFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ZlibCompression.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/InspectInfile.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzTabFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepNovoOutfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationStandardsFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPGenericFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/EDTAFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/Bzip2Ifstream.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/QcMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSstatsFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ExperimentalDesignFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ConsensusXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/XTandemXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/XTandemInfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MsInspectFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSNumpressCoder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepNovoInfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/CachedMzML.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/UnimodXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ControlledVocabulary.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MSPFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HDF5Connector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/FeatureXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SqMassFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/LibSVMEncoder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTA2DFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ProtXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotRemoteQuery.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataChainingConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataStoringConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataTransformingConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/NoopMSDataConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataSqlConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusMzTabWriter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataAggregatingConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataCachedConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SiriusFragmentAnnotation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/SwathFileConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DATAACCESS/MSDataWritingConsumer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMassFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/GzipIfstream.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/TraMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SequestInfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/DTAFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ParamXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/IndexedMzMLFileLoader.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/AbsoluteQuantitationMethodFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/KroenikFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SwathFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MascotInfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/XQuestResultXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/CsvFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/OSWFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/CompressedInputSource.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/XMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SpecArrayFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MS2File.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/Base64.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/FASTAFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PeakTypeEstimator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/IBSpectraFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PepXMLFileMascot.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/InspectOutfile.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SqliteConnector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteSwathHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzXMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/TraMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ToolDescriptionHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/FidHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MascotXMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSqliteHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLSpectrumDecoder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/AcqusHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzMLHandlerHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/XQuestResultXMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzQuantMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/IndexedMzMLDecoder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/UnimodXMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLDOMHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzIdentMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/ParamXMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/PTMXMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/MzDataHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/HANDLERS/CachedMzMLHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/SVOutStream.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PercolatorOutfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/CVMappingFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzQuantMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/TextFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzDataValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/XMLValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/SemanticValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzQuantMLValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzIdentMLValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/TraMLValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/VALIDATORS/MzMLValidator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/Bzip2InputStream.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ChromeleonFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/PTMXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzIdentMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/GzipInputStream.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/FileTypes.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MRMFeaturePickerFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MzDataFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/OMSSAXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/IdXMLFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/MRMFeatureQCFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FORMAT/ToolDescriptionFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectraSTSimilarityScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumCheapDPCorr.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignmentScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/ZhangSimilarityScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumAlignment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakAlignment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SteinScottImproveScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/SpectrumPrecursorComparator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSpectrum.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/SPECTRA/BinnedSharedPeakCount.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterFunctor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterHierarchical.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/CompleteLinkage.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/EuclideanSimilarity.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/SingleLinkage.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/HashGrid.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedCluster.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/AverageLinkage.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusterAnalyzer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/ClusteringGrid.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/COMPARISON/CLUSTERING/GridBasedClustering.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/MissedCleavages.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/FragmentMassError.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/QCBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/RTAlignment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/MzCalibration.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/Contaminants.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/Ms2SpectrumStats.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/Ms2IdentificationRate.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/QC/TIC.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RTSimulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DetectabilitySimulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/DigestSimulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/IonizationSimulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/MSSim.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/SimTypes.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawMSSignalSimulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/O18Labeler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler_impl.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/BaseLabeler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ICPLLabeler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/SILACLabeler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/LabelFreeLabeler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/LABELING/ITRAQLabeler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/EGHModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SIMULATION/RawTandemMSSignalSimulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/JavaInfo.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/File.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/StopWatch.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/NetworkGetRequest.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/SysInfo.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/FileWatcher.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/UpdateCheck.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/SYSTEM/RWrapper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ToolDescription.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ChargePair.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingRule.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/KDTree.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Utils/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Utils/MatrixUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Matrix.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/GridFeature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Date.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ListUtilsIO.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DBoundingBox.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CalibrationData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DistanceMatrix.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DRange.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/BinaryTreeNode.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/IsotopeCluster.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Compomer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Adduct.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/MatchedIterator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/LPWrapper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CVMappingTerm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DataValue.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DefaultParamHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DateTime.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConvexHull2D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CVMappings.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Param.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/ConstRefVector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/Map.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/FASTAContainer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/QTCluster.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/String.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/SeqanIncludeWrapper.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/MassExplainer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DIntervalBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/DPosition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/CVReference.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/DATASTRUCTURES/StringListUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegression.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/StatisticFunctions.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/GumbelMaxLikelihoodFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/AsymmetricStatistics.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/ROCCurve.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/BasicStatistics.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/AveragePosition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/GaussFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/QuadraticRegression.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/RegressionUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/GammaDistributionFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/PosteriorErrorProbabilityModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/GumbelDistributionFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/LinearRegressionWithoutIntercept.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/STATISTICS/Histogram.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSACModelLinear.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MathFunctions.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/NNLS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/NNLS/README: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/NNLS/NNLS.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/BilinearInterpolation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/SplineBisection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/MSNumpress.h: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/NonNegativeLeastSquaresSolver.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/LinearInterpolation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/CubicSpline2d.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSACModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/GridSearch.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/EmgGradientDescent.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSACModelQuadratic.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/BSpline2d.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/MATH/MISC/RANSAC.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakShape.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/OptimizePick.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletConstants.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderDefs.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/BaseModel_impl.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/ProductModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MRMMapping.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/MetaboTargetedAssay.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/TargetedExperiment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/IncludeExcludeTarget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSProteinInference.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/PSLPFormulation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/TARGETED/InclusionExclusionList.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/ILPDCWrapper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/FeatureDeconvolution.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/MRMFragmentSelection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MRM/ReactionMonitoringTransition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLHelper.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XFDRAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLAlgorithm.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/XQuestScores.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/XLMS/OPXLDataStructs.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinResolver.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ProteinInference.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifier.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureNode.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricNormalizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/ItraqConstants.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/AbsoluteQuantitation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/PIP/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/PIP/LocalLinearMap.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/PIP/PeakIntensityPredictor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeaturePicker.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathScores.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathWindowLoader.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SpectrumAddition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/IonMobilityScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMRTNormalizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DIAPrescoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakPickerMRM.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionPQPFile.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathWorkflow.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MasstraceCorrelator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathMapMassCorrection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureQC.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SwathQC.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMIonSeries.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/SONARScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMDecoy.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/TransitionTSVFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/MRMAssay.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/PeakIntegrator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/OPENSWATH/ConfidenceScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureDistance.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/LabeledPairFinder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLinear.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseSuperimposer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelBSpline.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationDescription.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/SimplePairFinder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelLowess.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/QTClusterFinder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureMapping.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/StablePairFinder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/TransformationModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/BaseGroupFinder.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SimpleSVM.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/SVM/SVMWrapper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/ModifiedPeptideGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlReport.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/HyperScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/PScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/RNPxlModificationsGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/RNPXL/MorpheusScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMapper.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusMapMergerAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusAdapterAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithm.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmRanks.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SiriusMSConverter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSScheduler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PrecursorPurity.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FalseDiscoveryRate.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AhoCorasickAmbiguous.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MessagePasserFactory.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/HiddenMarkovModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/MetaboliteSpectralMatching.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDMergerAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDScoreGetterSetter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/SimpleSearchEngineAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDBoostGraph.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmBest.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDRipper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/FIAMSDataProcessor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideIndexing.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PercolatorFeatureSetHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ProtonDistributionModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AScore.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmWorst.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/PeptideProteinResolution.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDConflictResolverAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/IDDecoyProbability.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/AccurateMassSearchEngine.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/BasicProteinInferenceAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/ID/ConsensusIDAlgorithmAverage.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIdentification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoPostScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoIonScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/DeNovoAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoring.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIdentificationCID.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/ANALYSIS/DENOVO/CompNovoIonScoringCID.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ToolHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/TOPPBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/MapAlignerBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/OpenSwathBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ParameterInformation.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/ConsoleUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/APPLICATIONS/INIUpdater.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/openms_data_path.h.in: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogStream.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/FactoryBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdIndexer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Constants.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/SingletonRegistry.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/StreamHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Types.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/PrecisionWrapper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Macros.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/GlobalExceptionHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/MacrosTest.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/VersionInfo.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/UniqueIdInterface.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Factory.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Init.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Helpers.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/LogConfigHandler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ProgressLogger.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/FuzzyStringComparator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/Exception.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/TypeAsString.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CONCEPT/ClassTest.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ElementDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RNaseDigestion.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RNaseDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/CrossLinksDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinitionsSet.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NASequence.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ResidueModification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AAIndex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Residue.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ModificationsDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EmpiricalFormula.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ProteaseDigestion.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetParser.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IntegerMassDecomposer.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/MassDecomposer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SpectrumAnnotator.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestionLogModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ProteaseDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Tagger.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/EnzymaticDigestion.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ResidueDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ModificationDefinition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Element.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/WeightWrapper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzyme.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeProtein.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/RibonucleotideDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/AASequence.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeRNA.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/DigestionEnzymeDB.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/NucleicAcidSpectrumGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/Ribonucleotide.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/SimpleTSGXLMS.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/CHEMISTRY/ModifiedNASequenceGenerator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/BASELINE/MorphologicalFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/TOFCalibration.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/PrecursorCorrection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/InternalCalibration.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/CALIBRATION/MZTrafoModel.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ThresholdMower.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementMarker.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SpectraMerger.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResampler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeDiffFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/PeakMarker.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/WindowMower.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/SqrtMower.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/BernNorm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ComplementFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IntensityBalanceFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/GoodDiffFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/LinearResamplerAlign.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/TICFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/IsotopeMarker.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/ParentPeakMower.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NeutralLossMarker.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Scaler.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/Normalizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/NLargest.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/TRANSFORMERS/FilterFunctor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/FastLowessSmoothing.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/SavitzkyGolayFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/SMOOTHING/LowessSmoothing.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/FeatureFindingMetabo.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/MassTraceDetection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/Deisotoper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/ElutionPeakDetection.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/IsotopeDistributionCache.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/SplinePackage.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/DATAREDUCTION/DataFilters.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/FILTERING/ID/IDFilter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/DataArrays.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ChromatogramSettings.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MSQuantifications.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumSettings.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinIdentification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Precursor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideIdentification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfo.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/IdentificationHit.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Identification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideHit.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/IonSource.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ProteinHit.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Tagging.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/SampleTreatment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/AbsoluteQuantitationStandards.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumLookup.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Modification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/CVTermListInterface.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/InstrumentSettings.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/CVTermList.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/AcquisitionInfo.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Sample.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Software.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalSettings.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterfaceUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Acquisition.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/PeptideEvidence.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoDescription.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Digestion.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/SourceFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/DataProcessing.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ScanWindow.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Gradient.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumMetaDataLookup.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoRegistry.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/CVTerm.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/DocumentIDTagger.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MassAnalyzer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationDataConverter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataQuery.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DBSearchParam.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingSoftware.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentificationData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/MoleculeParentMatch.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/ScoredProcessingResult.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/MetaData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/QueryMatchGroup.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentifiedSequence.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/ParentMolecule.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/AppliedProcessingStep.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/ParentMoleculeGroup.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/DataProcessingStep.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/MoleculeQueryMatch.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/ScoreType.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ID/IdentifiedCompound.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ExperimentalDesign.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/HPLC.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/DocumentIdentifier.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Instrument.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/ContactPerson.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/SpectrumIdentification.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/Product.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/IonDetector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/METADATA/MetaInfoInterface.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/MassTrace.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeManager.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSSpectrum.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramTools.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/ChromatogramPeak.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/AreaIterator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/DPeak.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/RichPeak2D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureMap.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMTransitionGroup.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/MRMFeature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/ComparatorUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/Feature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSExperiment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/RangeUtils.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusMap.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/BaseFeature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/OnDiscMSExperiment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/SpectrumHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConsensusFeature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/MSChromatogram.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak2D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/StandardDeclarations.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/FeatureHandle.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/PeakIndex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/StandardTypes.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/Peak1D.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/include/OpenMS/KERNEL/ConversionHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/operators.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/isoSpec++.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/allocator.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/element_tables.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/marginalTrek++.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/tabulator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/dirtyAllocator.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/IsoSpecConfig.cmake.in: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/allocator.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/isoMath.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/marginalTrek++.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/cwrapper.cpp: C source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/summator.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/isoSpec++.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/conf.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/platform.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/dirtyAllocator.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/isoMath.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/lang.h: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/operators.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/cwrapper.h: C source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/misc.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/misc.h: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/tabulator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/IsoSpec/element_tables.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/IsoSpec/README: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/LogDouble.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/draw_dot_interactive.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/graph_to_dot.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/L1Regularization.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/sign.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/shuffled_sequence.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/to_string.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/vector_ostream.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/inference_utilities.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/draw_dot.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/Clock.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Utility/ComparableMixin.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/ConvolutionTree.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/random_tree_subgraph.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/PriorityScheduler.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/Edge.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/split_connected_components.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/RandomSubtreeScheduler.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/Hyperedge.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/Scheduler.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/TreeScheduler.hpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/KikuchiGraph.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/InferenceEngine.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/SetHash.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/PNormMixin.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/ListQueue.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/MessagePasser.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/InferenceGraph.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/Queueable.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/FIFOScheduler.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/BeliefPropagationInferenceEngine.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/ContextFreeMessagePasser.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/TransformMessagePasser.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/HUGINMessagePasser.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/SetQueue.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/ConstantMultiplierMessagePasser.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/HybridFIFOPriorityScheduler.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Engine/ConvolutionTreeMessagePasser.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/PMF.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/dampen.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/scaled_pmf_dither.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/scaled_pmf_interpolate.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/semi_outer_product_and_quotient.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/squared.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/LabeledPMF.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/nonzero_bounding_box.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/marginal.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/divergence.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/scaled_pmf_dither_interpolate.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/PMF/scaled_pmf.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/MatrixTranspose.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Vector.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/VectorArithmetic.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/TRIOT.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/TensorUtils.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/ArrayShape.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/VectorView.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/VectorComparison.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/sum.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/embed.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/VectorTRIOT.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/p_norm.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/transpose.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/TensorView.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/TensorLike.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/Tensor.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/min_max.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/any_all.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/VectorLike.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/TemplateSearch.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/alloc.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Tensor/product.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/ConstantMultiplierDependency.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/BruteForceInferenceEngine.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/AdditiveDependency.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/BetheInferenceGraphBuilder.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/TableDependency.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/InferenceGraphBuilder.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/VariableBounds.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/Dependency.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/PseudoAdditiveDependency.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Evergreen/evergreen.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/BruteForceLangEngine.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/from_string.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/interpreter.l: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/LoopyLangEngine.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/VarTuple.hpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/LangDigraph.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/IntTuple.hpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/TensorLang.hpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/PrintBlock.hpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/interpreter.y: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/FrozenSet.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/Additive.hpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/LangEngine.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Language/InferenceEnginesBuilder.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/Twiddles.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/DIFButterfly.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/RealFFTPostprocessor.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/FFT.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/cpx.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/shape_to_log_shape.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/DIT.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/DIF.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/FFT/DITButterfly.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/isotope-quantification/IsotopeQuantifier.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/isotope-quantification/isotope_quantifier.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/isotope-quantification/Elements.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/isotope-quantification/formula_to_spectrum.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/isotope-quantification/element_isotope_list.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/p-convolution/naive_vs_numeric_max_convolution_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/p-convolution/max_convolution.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/p-convolution/create_data_for_max_convolution.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/brute-force-vs-loopy/main.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/gc-rich-hmm/main.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/gc-rich-hmm/Shigella_boydii.fasta: ASCII text, with very long lines, with no line terminators data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/gc-rich-hmm/HMMScheduler.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/gc-rich-hmm/HMM.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/simple-additive-2d/main.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/restaurant-bill/big-dipper-prices.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/restaurant-bill/big_dipper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/restaurant-bill/disable_trimming.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/fft/numpy_benchmark.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/fft/fft_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/fft/fftw_measure_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/fft/fftw_estimate_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/brute-force/prisoners_dilemma.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/binary-additive/main.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/1-convolution/naive_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/1-convolution/numpy_benchmark.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/1-convolution/fft_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/1-convolution/fftw_benchmark.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/language/demo.evg: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/language/readme.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/MassPeptideSolver.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/estimate_amino_acids_hydro.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/HydrophobicityPeptideSolver.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/estimate_amino_acids.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/PeptideSolver.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/Peptide.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/peptide_to_mass_and_hydrophibicity.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/demos/peptide-decomposition/estimate_amino_acids_mass.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/naive_convolve.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/p_convolve.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/any_and_all.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/fft_convolve.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/Convolution/custom_pow.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/readme.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/COBRAShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/LocalPairwiseShuffle.hpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/TableShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/UnrolledShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/XORShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/BitReversal.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/SemiRecursiveShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/StockhamShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/NaiveShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/src/BitReversedShuffle/RecursiveShuffle.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/evergreen/license.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BSpline.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BSpline.dox: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BSplineBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BSplineBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BandedMatrix.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BSplineLib.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/BSpline/BSpline.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/DOCUMENTATION: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/README: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/COPYRIGHT: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/eol-bspline/Doxyfile: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/iterators/internal_iterator.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/iterators/json_reverse_iterator.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/iterators/primitive_iterator.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/iterators/iter_impl.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/iterators/iteration_proxy.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/json_pointer.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/json_ref.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/output/binary_writer.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/output/serializer.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/output/output_adapters.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/value_t.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/conversions/from_json.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/conversions/to_json.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/conversions/to_chars.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/input/input_adapters.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/input/lexer.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/input/json_sax.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/input/parser.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/input/binary_reader.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/macro_unscope.hpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/exceptions.hpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/meta/void_t.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/meta/detected.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/meta/is_sax.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/meta/cpp_future.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/meta/type_traits.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/detail/macro_scope.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/adl_serializer.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/json_fwd.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/nlohmann/json.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/thirdparty/json/README: UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/openms/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TEST/PepNovoInfile_test_template2.txt: UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/TEST/VISUAL/parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MSPFile.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PTMXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MRMFeatureQCFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/OPTIONS/sources.cmake: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/OPTIONS/FeatureFileOptions.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/OPTIONS/PeakFileOptions.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MascotRemoteQuery.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SqliteConnector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ProtXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MSPGenericFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ParamXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/QcMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/XTandemInfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DTAFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/UnimodXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SequestOutfile.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SpecArrayFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/OMSSAXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/Base64.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ZlibCompression.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/Bzip2InputStream.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/IBSpectraFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/XTandemXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzTabFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ControlledVocabulary.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/IdXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/EDTAFile.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/CompressedInputSource.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/LibSVMEncoder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationMethodFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/Bzip2Ifstream.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DTA2DFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/CsvFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzDataFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/InspectOutfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataChainingConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataSqlConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataTransformingConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataStoringConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusFragmentAnnotation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataAggregatingConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/NoopMSDataConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SiriusMzTabWriter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataWritingConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/MSDataCachedConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/DATAACCESS/SwathFileConsumer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MSstatsFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MascotGenericFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ChromeleonFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SwathFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/FeatureXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/OSWFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/OMSSACSVFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/GzipIfstream.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PepXMLFileMascot.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/XMassFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ExperimentalDesignFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/XQuestResultXMLFile.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/GzipInputStream.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/TransformationXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/CVMappingFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/CachedMzML.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SequestInfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PeakTypeEstimator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MascotXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/KroenikFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/FASTAFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/TraMLHandler.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLDecoder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzXMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSpectrumDecoder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/FidHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/IndexedMzMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ToolDescriptionHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandler.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/PTMXMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzDataHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/AcqusHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteSwathHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLHandler.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzQuantMLHandler.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/ParamXMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MascotXMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/CachedMzMLHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/UnimodXMLHandler.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzIdentMLDOMHandler.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLHandlerHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/MzMLSqliteHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HANDLERS/XQuestResultXMLHandler.cpp: C++ source, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/InspectInfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PepNovoInfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/TextFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/IndexedMzMLFileLoader.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MsInspectFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzIdentMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PercolatorOutfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PepNovoOutfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MascotInfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SqMassFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/FileTypes.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MRMFeaturePickerFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/HDF5Connector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/PepXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzMLValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzIdentMLValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzQuantMLValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/XMLValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/SemanticValidator.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/MzDataValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/VALIDATORS/TraMLValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MSNumpressCoder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MS2File.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzQuantMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/FileHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/XMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ConsensusXMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/MzTab.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/TraMLFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/ToolDescriptionFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/AbsoluteQuantitationStandardsFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FORMAT/SVOutStream.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrumCompareFunctor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectraSTSimilarityScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakSpectrumCompareFunctor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectrum.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/PeakAlignment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSharedPeakCount.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumCheapDPCorr.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSumAgreeingIntensities.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumPrecursorComparator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/ZhangSimilarityScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignmentScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SpectrumAlignment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/SteinScottImproveScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/SPECTRA/BinnedSpectralContrastAngle.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/SingleLinkage.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/CompleteLinkage.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusteringGrid.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/EuclideanSimilarity.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/AverageLinkage.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterAnalyzer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedClustering.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterHierarchical.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/ClusterFunctor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/COMPARISON/CLUSTERING/GridBasedCluster.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/TIC.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/Contaminants.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/RTAlignment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/Ms2SpectrumStats.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/QCBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/MzCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/Ms2IdentificationRate.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/MissedCleavages.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/QC/FragmentMassError.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/DigestSimulation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/RawTandemMSSignalSimulation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/EGHFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/EGHModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/MSSim.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/RTSimulation.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/DetectabilitySimulation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/RawMSSignalSimulation.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/LabelFreeLabeler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/ITRAQLabeler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/O18Labeler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/BaseLabeler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/ICPLLabeler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/LABELING/SILACLabeler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SIMULATION/IonizationSimulation.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/NetworkGetRequest.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/UpdateCheck.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/StopWatch.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/FileWatcher.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/File.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/RWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/SysInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/SYSTEM/JavaInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/MatchedIterator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/BinaryTreeNode.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/Compomer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/String.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/Date.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/ToolDescription.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DataValue.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/ConstRefVector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtils.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/StringUtils.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DefaultParamHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/ListUtilsIO.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DRange.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/ChargePair.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/Adduct.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/Map.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DistanceMatrix.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DateTime.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/CVReference.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingRule.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/MassExplainer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappings.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DIntervalBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/GridFeature.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/CalibrationData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/CVMappingTerm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DBoundingBox.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/DPosition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/ConvexHull2D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/Matrix.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/FASTAContainer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/LPWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/Param.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/QTCluster.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/DATASTRUCTURES/StringListUtils.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelMaxLikelihoodFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/AsymmetricStatistics.cpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/AveragePosition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegressionWithoutIntercept.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/GaussFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/LinearRegression.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/GammaDistributionFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/QuadraticRegression.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/PosteriorErrorProbabilityModel.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/Histogram.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/BasicStatistics.cpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/ROCCurve.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/STATISTICS/GumbelDistributionFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/LinearInterpolation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/BSpline2d.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/NNLS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/NNLS/NNLS.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/NonNegativeLeastSquaresSolver.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/RANSACModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/MSNumpress.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/BilinearInterpolation.cpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/RANSAC.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/EmgGradientDescent.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelQuadratic.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/GridSearch.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/MathFunctions.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/CubicSpline2d.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/RANSACModelLinear.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/MATH/MISC/SplineBisection.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePick.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransformNumIntegration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakShape.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerMaxima.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerIterative.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/OptimizePeakDeconvolution.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerSH.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/TwoDOptimization.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerHiRes.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/ContinuousWaveletTransform.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/RAW2PEAK/PeakPickerCWT.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MaxLikeliFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexIsotopicPeakPattern.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ModelDescription.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/InterpolationModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussTraceFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmMRM.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/LevMarqFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BaseModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderMultiplexAlgorithm.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/SeedListGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWavelet.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ProductModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ElutionModelFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMasses.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmIsotopeWavelet.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/TraceFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPickedHelperStructs.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexDeltaMassesGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteProfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredPeak.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/GaussModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFiltering.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/BiGaussFitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/ExtendedIsotopeModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexClustering.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringProfile.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EGHTraceFitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeWaveletTransform.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/Fitter1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexSatelliteCentroided.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/EmgScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderIdentificationAlgorithm.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmPicked.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteredMSExperiment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/MultiplexFilteringCentroided.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/IsotopeModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/TRANSFORMATIONS/FEATUREFINDER/PeakWidthEstimator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MRMMapping.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSProteinInference.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/IncludeExcludeTarget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperiment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelection.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/OfflinePrecursorIonSelection.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/MetaboTargetedAssay.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/InclusionExclusionList.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PSLPFormulation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/PrecursorIonSelectionPreprocessing.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/TARGETED/TargetedExperimentHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/ILPDCWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/FeatureDeconvolution.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DECHARGING/MetaboliteFeatureDeconvolution.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MRM/ReactionMonitoringTransition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MRM/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MRM/MRMFragmentSelection.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLDataStructs.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLLFAlgorithm.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLSpectrumProcessingAlgorithms.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XQuestScores.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OPXLHelper.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/XFDRAlgorithm.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/XLMS/OpenPepXLAlgorithm.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTElevenPlexQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinResolver.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricNormalizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureMaps.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/QuantitativeExperimentalDesign.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricIsotopeCorrector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ProteinInference.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/KDTreeFeatureNode.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTTenPlexQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricQuantifier.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqEightPlexQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixteenPlexQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/TMTSixPlexQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/IsobaricChannelExtractor.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqConstants.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/PeptideAndProteinQuant.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/AbsoluteQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/QUANTITATION/ItraqFourPlexQuantitationMethod.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/PIP/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/PIP/LocalLinearMap.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/PIP/PeakIntensityPredictor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MasstraceCorrelator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMRTNormalizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SpectrumAddition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMBatchFeatureSelector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathWorkflow.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureSelector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMDecoy.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathQC.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakIntegrator.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathWindowLoader.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/IonMobilityScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/PeakPickerMRM.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SONARScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ChromatogramExtractorAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMTransitionGroupPicker.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionPQPFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureFinderScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathTSVWriter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeaturePicker.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SimpleOpenMSSpectraAccessFactory.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSCached.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessTransforming.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMS.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessOpenMSInMemory.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessSqMass.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/DataAccessHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DATAACCESS/SpectrumAccessQuadMZTransforming.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathOSWWriter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TargetedSpectraExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathScores.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/SwathMapMassCorrection.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/TransitionTSVFile.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMIonSeries.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/DIAPrescoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMAssay.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/MRMFeatureQC.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/ConfidenceScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/OPENSWATH/OpenSwathHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseGroupFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmKD.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelInterpolated.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmTreeGuided.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmKD.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringAffineSuperimposer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmMedian.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmQuantile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmSpectrumAlignment.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmLabeled.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmIdentification.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/SimplePairFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentTransformer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmUnlabeled.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmRecall.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelBSpline.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithmQT.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithmPrecision.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationDescription.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/QTClusterFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureMapping.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentEvaluationAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/LabeledPairFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/ConsensusMapNormalizerAlgorithmThreshold.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/BaseSuperimposer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/StablePairFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/PoseClusteringShiftSuperimposer.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureDistance.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLinear.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/MapAlignmentAlgorithmPoseClustering.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/TransformationModelLowess.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/MAPMATCHING/FeatureGroupingAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/SVM/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/SVM/SimpleSVM.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/SVM/SVMWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlModificationsGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/ModifiedPeptideGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/MorpheusScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/PScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/HyperScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlMarkerIonExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlFragmentAnnotationHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/RNPXL/RNPxlReport.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmAverage.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDDecoyProbability.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/PercolatorFeatureSetHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/AhoCorasickAmbiguous.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideProteinResolution.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDScoreGetterSetter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/AScore.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusMSConverter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusMapMergerAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDRipper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMergerAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmIdentity.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDMapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSDataProcessor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmRanks.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/PrecursorPurity.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/SiriusAdapterAlgorithm.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmBest.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDBoostGraph.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPMatrix.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/IDConflictResolverAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmSimilarity.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmWorst.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/MessagePasserFactory.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/BasicProteinInferenceAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/FalseDiscoveryRate.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/SimpleSearchEngineAlgorithm.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/HiddenMarkovModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/MetaboliteSpectralMatching.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/BayesianProteinInferenceAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ConsensusIDAlgorithmPEPIons.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/PeptideIndexing.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/FIAMSScheduler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/ProtonDistributionModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/ID/AccurateMassSearchEngine.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIonScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationCID.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentificationBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIdentification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoIdentification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringCID.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoPostScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/CompNovoIonScoringBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/ANALYSIS/DENOVO/DeNovoAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/APPLICATIONS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/APPLICATIONS/ConsoleUtils.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/APPLICATIONS/TOPPBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/APPLICATIONS/ParameterInformation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/APPLICATIONS/ToolHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/APPLICATIONS/INIUpdater.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/INTERFACES_IMPL/MockImplementation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/INTERFACES_IMPL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/Constants.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/ClassTest.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/VersionInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/LogConfigHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/UniqueIdIndexer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/UniqueIdGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/Exception.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/Init.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/PrecisionWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/StreamHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/TypeAsString.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/LogStream.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/GlobalExceptionHandler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/ProgressLogger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/Types.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/SingletonRegistry.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/FuzzyStringComparator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CONCEPT/UniqueIdInterface.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/NASequence.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinitionsSet.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDigestion.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/Tagger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeDB.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/WeightWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGeneratorXLMS.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/SpectrumAnnotator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/Ribonucleotide.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ResidueModification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/RibonucleotideDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeRNA.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/Residue.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/AASequence.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ModificationDefinition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/NucleicAcidSpectrumGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecompositionAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSIsotopeDistribution.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabet.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSElement.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/RealMassDecomposer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/Weights.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/IMS/IMSAlphabetTextParser.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/MASSDECOMPOSITION/MassDecomposition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/FineIsotopePatternGenerator.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopePatternGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsoSpecWrapper.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/IsotopeDistribution.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ISOTOPEDISTRIBUTION/CoarseIsotopePatternGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ElementDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ProteaseDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestionLogModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorTrainer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzyme.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ModifiedNASequenceGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/DigestionEnzymeProtein.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/EmpiricalFormula.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/CrossLinksDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDigestion.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ModificationsDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/RNaseDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/Element.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/SvmTheoreticalSpectrumGeneratorSet.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/SimpleTSGXLMS.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/ResidueDB.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/EnzymaticDigestion.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/CHEMISTRY/TheoreticalSpectrumGenerator.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/BASELINE/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/BASELINE/MorphologicalFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/PrecursorCorrection.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/MZTrafoModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/TOFCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/CALIBRATION/InternalCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/MarkerMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/WindowMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SqrtMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IntensityBalanceFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Scaler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResamplerAlign.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NLargest.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossDiffFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/LinearResampler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ThresholdMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeMarker.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/FilterFunctor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/NeutralLossMarker.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/SpectraMerger.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/Normalizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PreprocessingFunctor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/PeakMarker.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/IsotopeDiffFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ComplementMarker.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/TICFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/GoodDiffFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/ParentPeakMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/TRANSFORMERS/BernNorm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilterAlgorithm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/SavitzkyGolayFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/GaussFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/LowessSmoothing.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/SMOOTHING/FastLowessSmoothing.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/MassTraceDetection.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/Deisotoper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplinePackage.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/ElutionPeakDetection.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/FeatureFindingMetabo.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/IsotopeDistributionCache.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/SplineInterpolatedPeaks.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/DATAREDUCTION/DataFilters.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedian.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimator.cpp: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMeanIterative.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/NOISEESTIMATION/SignalToNoiseEstimatorMedianRapid.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/ID/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/FILTERING/ID/IDFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/PeptideEvidence.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/MSQuantifications.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/MetaInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ProteinHit.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Product.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/AcquisitionInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/DocumentIdentifier.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/MetaInfoInterface.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ScanWindow.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Modification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Instrument.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/METADATA/MassAnalyzer.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Tagging.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/SpectrumMetaDataLookup.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/DataArrays.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ChromatogramSettings.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/IonDetector.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/METADATA/DocumentIDTagger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/SpectrumSettings.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/InstrumentSettings.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Acquisition.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Digestion.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/PeptideIdentification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/DataProcessing.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/SampleTreatment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ContactPerson.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ExperimentalDesign.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/CVTermListInterface.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Gradient.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/IonSource.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/METADATA/CVTerm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Precursor.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms/source/METADATA/SpectrumLookup.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/SpectrumIdentification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/IdentificationHit.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ProteinIdentification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/AbsoluteQuantitationStandards.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Sample.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ID/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ID/IdentificationData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ID/IdentificationDataConverter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/PeptideHit.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Software.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/MetaInfoRegistry.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/CVTermList.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/ExperimentalSettings.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/MetaInfoDescription.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/SourceFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/Identification.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/METADATA/HPLC.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/MRMFeature.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/ConsensusFeature.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/Feature.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/Peak1D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/RangeManager.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/StandardTypes.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/RichPeak2D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/ConversionHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/ChromatogramTools.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/FeatureHandle.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/OnDiscMSExperiment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/Peak2D.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/PeakIndex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/MassTrace.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/SpectrumHelper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/AreaIterator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/MSExperiment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/MRMTransitionGroup.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/ConsensusMap.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/DPeak.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/MSSpectrum.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/FeatureMap.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/BaseFeature.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/MSChromatogram.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms/source/KERNEL/ChromatogramPeak.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms/cmake_findExternalLibs.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/includes.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms/configh.cmake: ASCII text data/openms-2.5.0+cleaned1/src/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/performance.rst: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/run_pipeline.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms_copy_deps.cmake: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/run_valgrind.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/CMakeLists.txt: UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/pyOpenMS/doc/Manual.tex: LaTeX 2e document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/doc/appendix.tex: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/doc/create_manual.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/create_cpp_extension.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/setup.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/MapAlignerPoseClustering.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/OpenSwathFeatureXMLToTSV.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/FileConverter.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/MRMTransitionGroupScorer.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/OpenSwathRTNormalizer.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/common.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/FeatureFinderCentroided.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/IDMapper.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/MRMTransitionGroupPicker.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/MRMMapper.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/common.pyc: python 2.7 byte-compiled data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/FeatureLinkerUnlabeledQT.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/PeakPickerHiRes.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyTOPP/OpenSwathChromatogramExtractor.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/run_unittests.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/__init__.py: Python script, UTF-8 Unicode text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/python_extras.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/sysinfo.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/Plotting.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/docompile.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/Constants.py: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pyopenms/run_cython.sh: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/env.py.in: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/License.txt: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/converters/__init__.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/converters/special_autowrap_conversionproviders.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConversionHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LightTargetedExperiment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakTypeEstimator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PercolatorFeatureSetHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureGroupingAlgorithmKD.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromatogramExtractor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSExperiment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AccurateMassSearchResult.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SwathFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProtXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeatureFinderScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IdentificationData.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakPickerMaxima.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/QTClusterFinder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakWidthEstimator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CrossLinksDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OnDiscMSExperiment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSDataStoringConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RANSACModelQuadratic.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SwathMap.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RangeManager.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CachedmzML.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FloatDataArray.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectraMerger.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IndexedMzMLFileLoader.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DateTime.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeDistributionCache.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzIdentMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/StringView.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeMarker.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Matrix.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmSimilarity.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TOFCalibration.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/NonNegativeLeastSquaresSolver.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzMLValidator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzTab.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BiGaussFitter1D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureGroupingAlgorithmQT.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Residue.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SimpleSVM.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OPXLHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassTraceDetection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFinderAlgorithmPickedHelperStructs.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AverageLinkage.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSDataAggregatingConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentAlgorithmPoseClustering.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SiriusFragmentAnnotation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ContactPerson.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVTermListInterface.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Scaler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Tagger.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PreprocessedPairSpectra.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DTAFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IMSDataConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeDiffFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MsInspectFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmRanks.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSSpectrum.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromatogramExtractorAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SILACLabeler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RNPxlModificationsGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMDecoy.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TMTSixPlexQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzTabFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SiriusMzTabWriter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MultiplexIsotopicPeakPattern.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ModificationDefinitionsSet.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SVMWrapper.pxd: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ModifiedPeptideGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Attachment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationModelLinear.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FalseDiscoveryRate.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IBSpectraFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Feature.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SimpleSearchEngineAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LinearResampler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeatureFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/GaussFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PrecursorIonSelection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ParamNode.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IDFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ctime.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenSwathScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Peak1D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ModificationsDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ParamXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureDistance.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMTransitionGroup.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XQuestResultXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AnnotationStatistics.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DeNovoIonScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SignalToNoiseEstimatorMedian.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ResidueDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XTandemInfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureMapping.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EmgModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TraMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakPickerHiRes.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SiriusAdapterAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFragmentSelection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IDDecoyProbability.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricChannelExtractor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaboliteSpectralMatching.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakShape.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LinearInterpolation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IonDetector.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DigestionEnzymeRNA.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DataFilters.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSstatsFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ContinuousWaveletTransform.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentEvaluationAlgorithmPrecision.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricIsotopeCorrector.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumLookup.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TargetedExperimentHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EDTAFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OMSSACSVFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InclusionExclusionList.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SemanticValidator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/KroenikFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumMetaDataLookup.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ISpectrumAccess.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Software.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IMSElement.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CompNovoIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectraSTSimilarityScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteinProteinCrossLink.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenPepXLLFAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DefaultParamHandler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeptideIndexing.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationModelInterpolated.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Identification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeaturePickerFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Digestion.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Instrument.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeptideAndProteinQuant.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassDecompositionAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TheoreticalSpectrumGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FASTAFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MultiplexDeltaMassesGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TextFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentTransformer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromatogramSettings.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricQuantifier.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IndexedMzMLDecoder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ElementDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChargePair.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MarkerMower.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentAlgorithmSpectrumAlignment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PSProteinInference.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BSpline2d.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteinInference.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OPXLSpectrumProcessingAlgorithms.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RealMassDecomposer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Normalizer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SignalToNoiseEstimatorMedianRapid.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Element.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TICFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/GridBasedCluster.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ElutionPeakDetection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TwoDOptimization.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SiriusAdapterHit.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DRange.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVMappingRule.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSNumpressCoder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SvmTheoreticalSpectrumGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassAnalyzer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Gradient.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaInfoRegistry.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IDConflictResolverAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IMSIsotopeDistribution.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSDataCachedConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Date.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ExperimentalSettings.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TMTSixteenPlexQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ILPDCWrapper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CsiAdapterRun.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAccessOpenMSInMemory.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProgressLogger.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeature.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/QuantitativeExperimentalDesign.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/HyperScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XLPrecursorComparator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSPFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Deisotoper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaInfoDescription.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PercolatorOutfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SvmTheoreticalSpectrumGeneratorSet.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeCluster.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AbsoluteQuantitation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromExtractParams.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ControlledVocabulary.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CubicSpline2d.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeaturePicker.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FileTypes.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmBest.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PepXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMIonSeries.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AAIndex.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransitionPQPFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/JavaInfo.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ContinuousWaveletTransformNumIntegration.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaInfo.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AbsoluteQuantitationStandardsFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumSettings.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LevMarqFitter1D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSDataWritingConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/VersionInfo.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SimTypes.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Map.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SignalToNoiseEstimator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenPepXLAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MultiplexDeltaMasses.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Product.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAnnotator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OMSSAXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/KDTreeFeatureMaps.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAccessTransforming.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OPXLDataStructs.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SiriusMSFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Compomer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConfidenceScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PSLPFormulation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromatogramPeak.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SequestInfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DocumentIdentifier.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Ribonucleotide.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureGroupingAlgorithmLabeled.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/String.pxd: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSPGenericFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeFitter1D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFinderAlgorithmSH.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RANSAC.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeptideEvidence.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SwathWindowLoader.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IntegerMassDecomposer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DTA2DFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFinder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureMap.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/UniqueIdGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RNaseDigestion.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MascotXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MascotGenericFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AhoCorasickAmbiguous.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/QTCluster.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/WindowMower.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OfflinePrecursorIonSelection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteaseDigestion.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RibonucleotideDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakPickerSH.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusFeature.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFileOptions.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SqrtMower.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAccessOpenMSCached.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DigestionEnzymeProtein.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DataArrays.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVTerm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BaseFeature.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LocalLinearMap.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MZTrafoModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeatureQCFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/GoodDiffFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSChromatogram.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ExperimentalDesign.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAccessOpenMS.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricNormalizer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RANSACModelLinear.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Sample.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationDescription.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVTermList.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMAssay.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/StablePairFinder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSDataSqlConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/NASequence.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EnzymaticDigestion.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransitionTSVFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ReactionMonitoringTransition.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAccessSqMass.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CalibrationData.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/UnimodXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EmgScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EnzymaticDigestionLogModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAccessQuadMZTransforming.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVMappingTerm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ClusteringGrid.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SimpleOpenMSSpectraFactory.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ModificationDefinition.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/smart_ptr.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CompNovoIdentificationCID.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DBoundingBox.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PrecursorIonSelectionPreprocessing.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SwathFileConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteinResolver.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AbsoluteQuantitationMethodFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Param.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/QcMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XMLHandler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureDeconvolution.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FilterFunctor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OSChromatogramMeta.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakIntensityPredictor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XLPrecursor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SwathMapMassCorrection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InspectInfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OptimizePeakDeconvolution.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Adduct.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DigestSimulation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAlignmentScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Types.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MorphologicalFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DeNovoPostScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVMappings.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LPWrapper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/StringDataArray.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XFDRAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/streampos.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeptideHit.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LinearResamplerAlign.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CompNovoIonScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusMap.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AccurateMassSearchEngine.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Acquisition.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentEvaluationAlgorithmRecall.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ResidueModification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FIAMSDataProcessor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ThresholdMower.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IdentificationHit.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LibSVMEncoder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusMapNormalizerAlgorithmMedian.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RNPxlMarkerIonExtractor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFinderAlgorithmIsotopeWavelet.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InternalCalibration.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteinIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMRTNormalizer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ClusterProxyKD.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BilinearInterpolation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DIAScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/HiddenMarkovModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ParamEntry.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SampleTreatment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzQuantMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmPEPMatrix.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaboliteFeatureDeconvolution.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMTransitionGroupPicker.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CsiFingerIdMzTabWriter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BaseGroupFinder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/NLargest.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassExplainer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DoubleList.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SplineInterpolatedPeaks.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzDataFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMMapping.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EmpiricalFormula.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SequestOutfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MS2File.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricQuantifierStatistics.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/NeutralLossDiffFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassDecomposition.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MasstraceCorrelator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMScoring.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MorpheusScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CsiAdapterHit.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenSwathDataAccessHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteaseDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TMTElevenPlexQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFinderAlgorithmPicked.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakPickerCWT.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AASeqWithMass.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenSwathOSWWriter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzMLSqliteHandler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IndexedMzMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AASequence.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IncludeExcludeTarget.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassDecomposer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IDMapper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Fitter1D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BinnedSpectrum.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DeNovoIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakIntegrator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SimplePairFinder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FileHandler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ScanWindow.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentEvaluationAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IdentificationDataConverter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CrossLinkSpectrumMatch.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DPosition.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentAlgorithmKD.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MapAlignmentAlgorithmIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConvexHull2D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RNaseDB.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenSwathHelper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PosteriorErrorProbabilityModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InspectOutfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ExperimentalDesignFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IMSAlphabetParser.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/KDTreeFeatureNode.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DigestionEnzyme.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeptideIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureGroupingAlgorithmUnlabeled.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DataProcessing.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SpectrumAlignment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/UniqueIdInterface.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Modification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RichPeak2D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TMTTenPlexQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureHandle.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EmgFitter1D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeptideProteinResolution.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureGroupingAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Precursor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OSSpectrumMeta.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ItraqFourPlexQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MassTrace.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaboTargetedAssay.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OSWFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DistanceMatrix.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SvmTheoreticalSpectrumGeneratorTrainer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromeleonFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationModelLowess.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ElutionModelFitter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FIAMSScheduler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InterpolationModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVReference.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/RNPxlReport.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LowessSmoothing.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmAverage.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SignalToNoiseEstimatorMeanIterative.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CachedmzMLHandler.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProteinHit.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/LabeledPairFinder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OpenSwathDataStructures.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CsiAdapterIdentification.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Time.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmIdentity.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IMSAlphabetTextParser.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BernNorm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TransformationModelBSpline.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InstrumentSettings.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DeNovoAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XQuestScores.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ItraqConstants.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakFileOptions.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TargetedExperiment.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeWavelet.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SimpleTSGXLMS.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PrecursorPurity.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MzMLSpectrumDecoder.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IntList.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Base64.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PepXMLFileMascot.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IntegerDataArray.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/OptimizePick.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ComplementMarker.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SeedListGenerator.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/GaussFitter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusMapNormalizerAlgorithmQuantile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/InterfaceDataStructures.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CompNovoIonScoringCID.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakIndex.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AdductInfo.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmPEPIons.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ProtonDistributionModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakPickerIterative.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PrecursorCorrection.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MRMFeatureQC.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsobaricChannelInformation.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/HPLC.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IDRipper.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeDistribution.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/BiGaussModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/XTandemXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakPickerMRM.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Peak2D.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSSim.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeModel.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SplinePackage.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SqMassFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ComplementFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFinderMultiplexAlgorithm.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/FeatureFindingMetabo.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/CVMappingFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IsotopeWaveletTransform.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Weights.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ChromatogramTools.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AcquisitionInfo.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IonSource.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/EmgGradientDescent.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PeakMarker.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/NeutralLossMarker.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IntensityBalanceFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IdXMLFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/DataValue.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/StringList.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SavitzkyGolayFilter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AbsoluteQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/SourceFile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MetaInfoInterface.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusIDAlgorithmWorst.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/IMSAlphabet.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/Tagging.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/AbsoluteQuantitationStandards.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/File.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/GaussTraceFitter.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ParentPeakMower.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TargetedSpectraExtractor.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MSQuantifications.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ConsensusMapNormalizerAlgorithmThreshold.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/TheoreticalSpectrumGeneratorXLMS.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/PythonMSDataConsumer.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/ItraqEightPlexQuantitationMethod.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/pxds/MascotInfile.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/ClassesToWrap.txt: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/README: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/FOR_DEVELOPERS: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/README.rst: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/INTERNALS: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/fix_pyopenms_dependencies_on_mac.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/_Interfaces_Spectrum.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/NASequence.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/DPosition.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/SwathMap.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/OpenSwathDataAccessHelper.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/Attachment.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/AASequence.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/InspectInfile.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/Interfaces.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ResidueDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/PeakTypeEstimator.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/StringDataArray.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/OSChromatogram.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/_Interfaces_Chromatogram.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/StandardTypes.pyx: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/FloatDataArray.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/FeatureMap.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/SpectrumAlignment.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/Base64.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/SequestOutfile.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/IsotopeMarker.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/SequestInfile.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/NeutralLossMarker.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ProteaseDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/AScore.pxd: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/IDRipper.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/DIAScoring.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/SpectrumAlignmentScore.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MSChromatogram.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/SignalToNoiseEstimatorMedian.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ConsensusMap.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MSQuantifications.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/RibonucleotideDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/String.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ModificationsDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/IntegerDataArray.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MapAlignmentAlgorithmIdentification.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MSSpectrum.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MzXMLFile.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MetaInfoInterface.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MzMLFile.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ComplementMarker.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/Map.pyx: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/QcMLFile.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ADD_TO_FIRST.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/Param.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ADD_TO_ALL_OTHER.pyx: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/RNaseDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MatrixDouble.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/MSExperiment.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/streampos.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ConvexHull2D.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ADD_TO_ALL.pyx: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/CrossLinksDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/ElementDB.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/addons/OSSpectrum.pyx: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/README_WRAPPING_NEW_CLASSES: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/run_nose.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/mac_fix_automation_mojave.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/dist-scripts/manylinux.patch: unified diff output, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/dist-scripts/manylinux.patch2: unified diff output, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/dist-scripts/create-manylinux.sh: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/valgrind-python.supp: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/__init__.py: empty data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.param: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/temp_test.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/__init__.py: empty data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_Isobaric_Quantitation.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.param: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_BilinearInterpolation.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.indexed.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_ChromatogramExtractor.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_TraML.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.mzxML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/ExperimentalDesign_input_2.tsv: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_Convexhull.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test000.py: Python script, UTF-8 Unicode text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_StandardTypes.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_MzMLConsumer.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test2.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_MzXMLConsumer.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_MRMFeatureFinderScoring.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.pep.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_FileIO.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.transformationXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/testCVTermList.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_MSSpectrumAndRichSpectrum.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_Smoothing.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_SpectrumAccessOpenMS.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/collections_.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test1.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_tutorial.py: Python script, ASCII text executable, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_BaselineFiltering.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_ISpectrumAccess.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_DIAScoring.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/testSpecialCases.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_MSNumpressCoder.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_OpenSwathDataStructures.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/testLightTargetedExperiment.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_ChromatogramExtractorAlgorithm.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test1.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/unittests/test_SpectraFilter.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/integration_tests/test_MRMRTNormalizer.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.transformationXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test1.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test1.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/test.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/memoryleaktests/__init__.py: empty data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/memoryleaktests/testAll.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/tests/memoryleaktests/.gitignore: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/run_memleak_tests_and_unittests.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/run_integrationtest.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/version.py: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/doCythonCompileOnly.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/run_memleaks.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/pyOpenMS/MANIFEST.in: ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/extra_includes/python_ms_data_consumer.hpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/pyOpenMS/check_test_coverage.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/utils/RNADigestor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/ERPairFinder.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/QCEmbedder.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/PSMFeatureExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/IDDecoyProbability.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/TargetedFileConverter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/OpenSwathDIAPreScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/OpenSwathMzMLFileCacher.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/OpenSwathWorkflow.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/ImageCreator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/SpecLibCreator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/Digestor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/utils/TransformationEvaluation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/RNPxlXICFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/QCExporter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/DecoyDatabase.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/AssayGeneratorMetabo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/Epifany.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/DatabaseFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MultiplexResolver.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/RTEvaluation.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MzMLSplitter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/PeakPickerIterative.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/SequenceCoverageCalculator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/QCCalculator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MetaboliteAdductDecharger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MSFraggerAdapter.cpp: C++ source, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/utils/MRMTransitionGroupPicker.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/RNAMassCalculator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/RNPxlSearch.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/utils/MetaProSIP.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/NucleicAcidSearchEngine.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/DeMeanderize.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MassCalculator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MSSimulator.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/QCShrinker.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/QCMerger.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/SiriusAdapter.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/utils/TICCalculator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MRMPairFinder.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/FeatureFinderSuperHirn.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/SvmTheoreticalSpectrumGeneratorTrainer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/ClusterMassTracesByPrecursor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/OpenSwathRewriteToFeatureXML.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/FFEval.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/QCImporter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/SpectraSTSearchAdapter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/FuzzyDiff.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/FeatureFinderMetaboIdent.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/executables.cmake: ASCII text data/openms-2.5.0+cleaned1/src/utils/NovorAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/AccurateMassSearch.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/OpenMSInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/IDMassAccuracy.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MetaboliteSpectralMatcher.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/SimpleSearchEngine.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/DigestorMotif.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/QCExtractor.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/IDExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/LowMemPeakPickerHiRes.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/utils/ProteomicsLFQ.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/IDScoreSwitcher.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/utils/XMLValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/MSstatsConverter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/SemanticValidator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/LowMemPeakPickerHiResRandomAccess.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/ClusterMassTraces.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/OpenSwathFileSplitter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/INIUpdater.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/IDSplitter.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/utils/CVInspector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/utils/LabeledEval.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnUtil.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/include/OpenMS/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMS.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Feature.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundControl.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FeatureLCProfile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS1FeatureMerger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/Deisotoper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Info.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/IsotopicDist.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SHFeature.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2ConsensusSpectrum.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ClusteredMS2ConsensusSpectrum.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/SuperHirnParameters.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/BackgroundIntensityBin.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MS2Fragment.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/MSPeak.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCMSCData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ProcessData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/RawData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/FTPeakDetectController.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/CentroidPeak.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/ConsensusIsotopePattern.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/SUPERHIRN/LCElutionPeak.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSHCtrl.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/superhirn/source/TRANSFORMATIONS/FEATUREFINDER/FeatureFinderAlgorithmSH.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PrecursorMassCorrector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PercolatorAdapter.cpp: C++ source, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/topp/IDMerger.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/FeatureFinderMultiplex.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/SpectraFilterParentPeakMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenSwathFeatureXMLToTSV.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OMSSAAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureFinderMRM.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/GenericWrapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenSwathChromatogramExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PTModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/GNPSExport.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/CompNovoCID.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/ProteinResolver.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MSGFPlusAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/BaselineFilter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenSwathRTNormalizer.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/SpectraFilterThresholdMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapAlignerTreeGuided.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/OpenSwathAnalyzer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FileInfo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureLinkerBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/IDRTCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpecLibSearcher.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapStatistics.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraFilterBernNorm.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureFinderCentroided.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenSwathConfidenceScoring.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/XFDR.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapAlignerPoseClustering.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/IDRipper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenPepXLLF.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/topp/FileConverter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/RTPredict.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FileMerger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PrecursorIonSelector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraFilterScaler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenSwathAssayGenerator.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/IDFilter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/MaRaClusterAdapter.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/topp/Resampler.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/OpenSwathDecoyGenerator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FidoAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/IDMapper.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/FeatureLinkerLabeled.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MzTabExporter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapAlignerSpectrum.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/TOFCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureFinderMetabo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/IDConflictResolver.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/NoiseFilterSGolay.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/InclusionExclusionListCreator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapAlignerIdentification.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/FeatureFinderIsotopeWavelet.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapRTTransformer.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/OpenPepXL.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/topp/ProteinInference.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/QualityControl.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MyriMatchAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/FeatureLinkerUnlabeled.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/CruxAdapter.cpp: C++ source, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/topp/SeedListGenerator.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/InspectAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/ConsensusMapNormalizer.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/IDPosteriorErrorProbability.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraMerger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MascotAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/InternalCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/RTModel.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureLinkerUnlabeledQT.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/ConsensusID.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/IDFileConverter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/PeptideIndexer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/DTAExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraFilterNLargest.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PepNovoAdapter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MascotAdapterOnline.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/SpectraFilterWindowMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PeakPickerWavelet.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MapNormalizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PeakPickerHiRes.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/NoiseFilterGaussian.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/HighResPrecursorMassCorrector.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/PhosphoScoring.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/ExternalCalibration.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FalseDiscoveryRate.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/executables.cmake: ASCII text data/openms-2.5.0+cleaned1/src/topp/CompNovo.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraFilterSqrtMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/PTPredict.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureFinderIdentification.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/TextExporter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/Decharger.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/XTandemAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/FileFilter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/ExecutePipeline.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraFilterNormalizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/FeatureLinkerUnlabeledKD.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/MRMMapper.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/IsobaricAnalyzer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/EICExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/CometAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/MassTraceExtractor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/SpectraFilterMarkerMower.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/topp/ProteinQuantifier.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/topp/LuciphorAdapter.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBar.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DCanvas.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DCanvas.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASVertex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASLogWindow.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/LayerData.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedTabBarWidgetInterface.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumCanvas.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/HistogramDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DPrefDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/LayerStatisticsDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFileDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASToolConfigDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DGoToDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/FeatureEditDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewPrefDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPViewOpenDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASIOMappingDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/ToolsDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum2DGoToDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASInputFilesDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASOutputFilesDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum1DPrefDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/TOPPASVertexNameDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SaveImageDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/Spectrum3DPrefDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/SpectrumAlignmentDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/DIALOGS/DataFilterDialog.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DOpenGLCanvas.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASToolVertex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MultiGradient.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASMergerVertex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResource.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/AxisWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/AxisTickCalculator.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum1DWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASInputFileListVertex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewIdentificationViewBehavior.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASEdge.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTreeView.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ParamEditor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum2DWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASResources.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ColorSelector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASTabBar.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPViewSpectraViewBehavior.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ScanWindowVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PeptideHitVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/TaggingVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ModificationVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SourceFileVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/HPLCVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/PrecursorVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DataProcessingVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinHitVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SoftwareVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/GradientVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/AcquisitionVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ProductVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/ContactPersonVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MetaInfoVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/MassAnalyzerVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonSourceVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/IonDetectorVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/BaseVisualizerGUI.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/InstrumentVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/SampleVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/VISUALIZER/DigestionVisualizer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/HistogramWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPASBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/INIFileEditorWindow.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/APPLICATIONS/TOPPViewBase.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASScene.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ListEditor.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MetaDataBrowser.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotations1DContainer.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DCaret.h: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DTextItem.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DItem.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DDistanceItem.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/ANNOTATION/Annotation1DPeakItem.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraIdentificationViewWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASOutputFileListVertex.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASSplitterVertex.h: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectrumWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MultiGradientSelector.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/Spectrum3DCanvas.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/MISC/GUIHelpers.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/GUIProgressLoggerImpl.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/EnhancedWorkspace.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/TOPPASWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/SpectraViewWidget.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/include/OpenMS/VISUAL/AxisPainter.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/CMakeLists.txt: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/qt_wrap_ui.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTreeView.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASEdge.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/AxisPainter.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewIdentificationViewBehavior.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/elements.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/reset_zoom.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/TOPPAS.png: PNG image data, 64 x 64, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/TOPPView_Splashscreen.png: PNG image data, 619 x 344, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/resources.qrc: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/percentage.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/lines.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/labels.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/lin.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/convexhulls.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/cursor_measure.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/INIFileEditor.png: PNG image data, 64 x 64, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/TOPPAS_Splashscreen.png: PNG image data, 640 x 400, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/Recycling_symbol.svg: SVG Scalable Vector Graphics image data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/convexhull.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/snap.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/stop_sign.svg: SVG Scalable Vector Graphics image data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/tile_vertical.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/peptidemz.png: PNG image data, 32 x 32, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/projections.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/cursor_zoom.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/unassigned.png: PNG image data, 32 x 32, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/log.png: PNG image data, 32 x 32, 8-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/TOPPView.png: PNG image data, 64 x 64, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/tile_horizontal.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/cursor_move.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/TOPP_about.png: PNG image data, 150 x 211, 8-bit/color RGB, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/peaks.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ICONS/precursors.png: PNG image data, 32 x 32, 16-bit/color RGBA, non-interlaced data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DCanvas.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASTabBar.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedWorkspace.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DCanvas.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.ui: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.ui: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/ToolsDialog.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.ui: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASToolConfigDialog.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/DataFilterDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewPrefDialog.ui: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SaveImageDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPViewOpenDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DPrefDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASOutputFilesDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/HistogramDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/SpectrumAlignmentDialog.ui: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.ui: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DGoToDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASIOMappingDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum2DGoToDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/LayerStatisticsDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum3DPrefDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/FeatureEditDialog.ui: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFileDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASVertexNameDialog.ui: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TheoreticalSpectrumGenerationDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/Spectrum1DPrefDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/DIALOGS/TOPPASInputFilesDialog.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASLogWindow.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.ui: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ColorSelector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASOutputFileListVertex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASToolVertex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASInputFileListVertex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DOpenGLCanvas.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/SpectrumCanvas.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradient.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum3DCanvas.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASScene.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASMergerVertex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum2DWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASSplitterVertex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/GUIProgressLoggerImpl.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/Spectrum1DWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/SpectraViewWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBarWidgetInterface.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentSettingsVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizerGUI.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DataProcessingVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinIdentificationVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MetaInfoDescriptionVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SourceFileVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProteinHitVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DigestionVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/HPLCVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/DocumentIdentifierVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SampleVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ProductVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonSourceVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/TaggingVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideIdentificationVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ScanWindowVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/MassAnalyzerVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ExperimentalSettingsVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/InstrumentVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PrecursorVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ContactPersonVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/IonDetectorVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionInfoVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/AcquisitionVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/BaseVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/GradientVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SpectrumSettingsVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/ModificationVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/SoftwareVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/VISUALIZER/PeptideHitVisualizer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/LayerData.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPViewBase.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/INIFileEditorWindow.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/MISC/QApplicationTOPP.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/TOPPASBase.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView-resources/TOPPView.icns: Mac OS X icon, 242845 bytes, "is32" type data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView-resources/TOPPView.plist.in: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS-resources/TOPPAS.plist.in: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS-resources/TOPPAS.icns: Mac OS X icon, 162972 bytes, "is32" type data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.rc: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.ico: MS Windows icon resource - 12 icons, 16x16, 16 colors, 4 bits/pixel, 16x16, 8 bits/pixel data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.ico: MS Windows icon resource - 12 icons, 16x16, 32 bits/pixel, 16x16, 8 bits/pixel data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor.rc: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/executables.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPView.ico: MS Windows icon resource - 12 icons, 16x16, 16 colors, 4 bits/pixel, 16x16, 8 bits/pixel data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor-resources/INIFileEditor.icns: Mac OS X icon, 288241 bytes, "is32" type data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/INIFileEditor-resources/INIFileEditor.plist.in: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/APPLICATIONS/GUITOOLS/TOPPAS.rc: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/EnhancedTabBar.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPViewSpectraViewBehavior.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/AxisTickCalculator.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResources.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ParamEditor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DDistanceItem.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DCaret.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DTextItem.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotations1DContainer.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DPeakItem.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ANNOTATION/Annotation1DItem.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/SpectraIdentificationViewWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/HistogramWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASVertex.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/MISC/sources.cmake: ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/MISC/GUIHelpers.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/MultiGradientSelector.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASResource.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/MetaDataBrowser.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/TOPPASWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/AxisWidget.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/source/VISUAL/ListEditor.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/includes.cmake: C source, ASCII text data/openms-2.5.0+cleaned1/src/openms_gui/add_mac_bundle.cmake: ASCII text data/openms-2.5.0+cleaned1/src/tests/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/toppas/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/toppas/ExecutePipeline_2.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/toppas/ExecutePipeline_1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/toppas/ExecutePipeline_1.trf.in: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/toppas/ExecutePipeline_1.toppas: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/coding/cpplint.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/src/tests/coding/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/coding/cppcheck.cmake: ASCII text data/openms-2.5.0+cleaned1/src/tests/coding/createcpplinttests.cmake: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_2_models.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterSGolay_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_15_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RNAMassCalculator_1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_49_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderCentroided_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_5_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_2_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_1_output2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_1_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_3_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_43_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_7_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_1_input1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_16_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathRTNormalizer_1_output.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test.index: data data/openms-2.5.0+cleaned1/src/tests/topp/SeedListGenerator_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTModel_1_input_positive.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTModel_1_input_negative.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_43_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_10_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterGaussian_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_output1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_3_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_22_input.consensusXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFeatureXMLToTSV_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_1_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_2_input.model_additional_parameters.paramXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_5_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_26_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AMS_test_Struct.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test4.index: data data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_10_input.pqp: SQLite 3.x database, last written using SQLite version 3015000 data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_output_3.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_49_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_OMSSA_input2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_OMSSA_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_2_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_1_residuals.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_15_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_1_input2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetaboIdent_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterSGolay_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpecLibSearcher_1.MzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_31_input.mzML: empty data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_3_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_7_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_3_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_1_BSA1.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_12_input.psms: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinResolver_1_output3.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_2_out.mgf: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_3_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MzTabExporter_3_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_14_input.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_2_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MzTabExporter_2_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_6_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_1_input2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_9_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_4_input.model_additional_parameters.paramXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_21_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_30_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerLabeled_2_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_4_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_1_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_6_output.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_10_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MassTraceExtractor_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMRM_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_3_input1.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_21_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_8_output.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_7_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_1_out.mgf: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_17_output.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_12_input.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_22_output.consensusXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2538_1091_2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_uku_output_consensus_traml.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_5_input.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FuzzyDiff_3_in2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QuantIDMapper_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusXMLFile_1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_output_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_1_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/CompNovo_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderSuperHirn_input_2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_7_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_2_output.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFeatureXMLToTSV_3_output.short.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_1_output1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_3_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_9_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_sirius_intsort_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathRTNormalizer_3_output.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out1.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_single.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_2_input.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterSGolay_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_trafo2.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_10_input.mzML: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerIterative_2.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_5_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_5_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_input.fasta: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/CMakeLists.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_13_input.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/PTPredict_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_3_input.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_output.spec.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_8_input.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_3_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DTAExtractor_3_output.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_14_output1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_PTMs.xml: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_output_noMetaData.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_25_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_2_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_4_chrom_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_41_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterWindowMower_2_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDRTCalibration_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_17_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_2_input_negative.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_10_input.idXML: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_8_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_1_input_chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_4_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_1_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_23_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderSuperHirn_input_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PepNovo_PTMs.xml: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_output2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2538_1091_2_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_3_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinInference_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_27_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_2_output2.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/INIUpdater_3_old_out.toppas: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_3_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_3_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_5_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/LowMemPeakPickerHiRes_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_2_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PepNovoAdapter_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFeatureXMLToTSV_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_1_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_6_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_6_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinder_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_3_output2.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_1_input3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_14_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_2_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderIdentification_2_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_1_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinInference_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_2_output2.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_5_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_2_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_9_output.traML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFeatureXMLToTSV_output.short.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_29_input.mzML: empty data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_46_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_18_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/BayesianProteinInference_test.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_output.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_2_lock.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/check_ini.cmake: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MassCalculator_2_output.txt: CSV text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_5_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_3_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_1_input.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_29_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_18_input.fasta: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_1_output3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_OMSSA_4.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_10_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTPredict_1_input.model_samples: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_11_input.peplist: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_1_in.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_44_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_1_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDScoreSwitcher_2_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_trafo_linear.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MassCalculator_1_output.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_input_4.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in1.trafoXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_in3.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_2_input2.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_2_swathfile.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_mz1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_3_output.samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Sequest_PTMs.xml: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MzTabExporter_1_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/swath_windows_overlap.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_1_input.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/PTPredict_1_input.model_additional_parameters: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_1_calibrants.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_12_output.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_11_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_16_input.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_15_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_11_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_1_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ExternalCalibration_2_MS2_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/INIUpdater_2_broken.toppas: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MassTraceExtractor_2.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_3_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_7_input1.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_11_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/WRITE_INI_OUT.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_25_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/newMergerTest_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_5_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_9_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_4_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_12_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2810_1091_3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_1_input1.mascotXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_3_input2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_trafo1.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_4_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_2_input.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMRM_1_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DBImporter.ini.in: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_2_noEPD_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_4_output.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFeatureXMLToTSV_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathRTNormalizer_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_uku_output_consensus.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IsobaricAnalyzer_output_1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_2_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_sirius_restrict_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/swath_windows_tooshort.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_24_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_4_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterSGolay_2_output.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_9_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_47_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/CompNovo_1.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_output_consensus.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteomicsLFQTestScripts/run_lfq.sh: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteomicsLFQTestScripts/run_fast.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/tests/topp/ProteomicsLFQTestScripts/run_BSA.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/src/tests/topp/ProteomicsLFQTestScripts/create_sim_data.sh: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_3_output2.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_6_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_17_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_3_input1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_2_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_3_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_2_residuals.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_5_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_1_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_3_trafo.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_4_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_4_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_6_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InspectAdapter_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_16_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_8_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_2Dopt_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDSplitter_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTraMLToTSV_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2538_1091_2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/InspectAdapter_2_parameters.ini: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/PepNovo.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_32_select_collision_energy.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SeedListGenerator_3_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_6_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_3_2_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PepNovoAdapter_5_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMRM_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_trafo3.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterSqrtMower_1_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_6_input1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_1_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_5_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_10_trafo1.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_8_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_const: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_6_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_1_input.dta: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/SimpleSearchEngine_1.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_2_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_29_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinInference_proteins.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_13_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_9_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_4_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_26_input.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_2_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_17_input.fasta: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_5_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_3_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_7_backgroundSubtraction.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_7_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SpecLibSearcher_1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_9_input.idXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_4_input2.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_6_input1.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterWindowMower_1_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AccurateMassSearch_2_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_2_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerIterative_2_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_4_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_4_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_1.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_4_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_3_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_4_input.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PTModel_1_output.samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_44_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_33_remove_isolation_window.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_3_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_b_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_3_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_5_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_25_input.mzML.gz: gzip compressed data, was "FileFilter_25_input.mzML", last modified: Fri Sep 21 08:12:56 2012, max compression, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 9371231 data/openms-2.5.0+cleaned1/src/tests/topp/openswath_tmpfile_4.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_3_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_3_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_3.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_9_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMTransitionGroupPicker_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_Mascot_output2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/Inspect.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_output3.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_4_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_7_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_input_2_unimod.xml: XML 1.0 document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_1_output_conflicts.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_1_output1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1.fasta: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_7_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_5_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ffm_output_consensus.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out6.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_7_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_13_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_1_input3.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IsobaricAnalyzer.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_6_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_16_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinResolver_1_output2.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AMS_test_Mapping.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_mz2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test2.index: data data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_missed_cleavages_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_1_input.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_4_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_19_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterSqrtMower_1_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_5_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SeedListGenerator_3_output2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/DTAExtractor_2_output.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_42_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_19_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_19_output.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_4_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_dc_input2.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_25_input.idXML: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_1_input2.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_2_input3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_4_output_conflicts.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerated_empty.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_4_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_14_input.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_5_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_1_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_3_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_28_input.mzML.gz: gzip compressed data, was "FileFilter_28_input.mzML", last modified: Fri Jan 25 16:07:49 2013, max compression, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 267081 data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_6_input.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_4_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_21_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_12_input.tsv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_3070_1191_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_1_output2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_1_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_5_out.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_output.spec.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_3_output.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_1_output3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/Decharger_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerLabeled_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_2_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_2_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_intsort_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2810_1091_3_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in2.mzML.gz: gzip compressed data, was "QualityControl_1_in2.mzML", last modified: Wed Sep 11 13:48:09 2019, max speed, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 2964478 data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_consensus_features.wsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/CompNovoCID_1.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_11_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test4.trie: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_8_input.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in2.trafoXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterGaussian_2_output.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_8_input.notype: NetCDF Data Format data data/openms-2.5.0+cleaned1/src/tests/topp/MS3TMT10Plex_test.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_1_input1.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_1_input.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_2_output1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_1_input.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_2_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinder_2_output.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_3_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_10_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_8_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_4_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_20_output.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_9_output.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_3_in.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_15_input.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DBExporter_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_ref_masses: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_36_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_4_output_proteins.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_4.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_5_output.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SimpleSearchEngine_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_3_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out7.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_5_input2.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_output_3.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MzMLSplitter_output_part1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/DecoyDatabase_1_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_3_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_6_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_3070_1191_3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ImageCreator_1_output.bmp: PC bitmap, Windows 3.x format, 20 x 15 x 24, image size 900, resolution 3937 x 3937 px/m, cbSize 954, bits offset 54 data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterGaussian_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_1_models.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterSGolay_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_3_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_6_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/INIUpdater_1_noupdate.toppas: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_3_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_1.fasta: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out3.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_18_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_2_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_13_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_2_output_2.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDRTCalibration_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_4_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_6_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MetaProSIP_1_input.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_18_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_5_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_45_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AccurateMassSearch_3_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusMapNormalizer_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorMassCorrector_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_17_output.ibspectra.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_input_3_unimod.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/CompNovo_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_17_output.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_10_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_7_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out4.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_output_3.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_1_output.json: JSON data data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_4_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_bad_data.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_16_input.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_output_2.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTModel_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_7_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_13_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_4_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_input.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test.trie: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/swath_windows.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinResolver_1_input.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_16_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/BaselineFilter_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_2_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_2_in.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_2_output1.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FuzzyDiff_1_in2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetaboIdent_1_input.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_27_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_sirius_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_14_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_rt.model_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_9_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_5_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_24_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MascotAdapter_1_output.mascot_in: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DBExporter.ini.in: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_6.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_8_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorMassCorrector_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_6_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_5_input1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_10_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_22_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_6_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PepXMLFile_test.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_3_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_4_input.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerLabeled_1_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_1_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_39_input_corrupt.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMRM_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_14_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in.consensusXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_6_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerLabeled_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterGaussian_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_2_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_5_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TMTTenPlexMethod_test.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_6_output1.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_10_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerIterative_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_2Dopt_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_1_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_XTandem_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_intsort_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteomicsLFQ_1_out.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_2_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMMapping_output.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_11_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InspectAdapter_2_output.inspect_in: SPEC data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_1_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_5_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test5.trie: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_4_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_1_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_2_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/WRITE_INI_IN.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/BaselineFilter_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SequestAdapter_2_output.sequest_in: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_23_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_9_input1.traML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_6_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderSuperHirn_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_22_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerIterative_1.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_2_lockmass.mzML.gz: gzip compressed data, was "InternalCalibration_2_lockmass.mzML", last modified: Tue Mar 20 21:20:05 2018, max speed, from Unix, original size modulo 2^32 824069 data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_45_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_3_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_input1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_4_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PepXMLFile_test.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_1_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_9_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_2_input.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_1_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_trafo_none.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_2_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_40_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_12_input.peptides.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_11_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerIterative_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_3_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_1_output1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorMassCorrector_1.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FuzzyDiff.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_4_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinder_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_16_input.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_4_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_2_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QuantIDMapper_1_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_5_input.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/LowMemPeakPickerHiRes_RandomAccess_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_out.mzTab: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_5_output1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_1_input1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_3_output1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SequestAdapter_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_1035_1178_4_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_2_noEPD.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_2_output3.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderRaw_1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_19_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_input.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_6_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_3_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_2_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_1_output_1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_output_lowMem.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderIdentification_2_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_8_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_12_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out4.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_22_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MascotAdapter_2_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTModel_1_output.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Sequest.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_2.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_2_input.someInputDTA2D: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_8_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_3_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_4_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_3_chrom_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_2_output_negative.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_11_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_input3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_1_BSA1_OMSSA.idXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_6.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDRTCalibration_2_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_deconv_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterWindowMower_2_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_9_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_7_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_input2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/NucleicAcidSearchEngine_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_3.idXML: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_17_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_input2.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Resampler_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/Sequest_FASTAFile_test.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_11_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFileSplitter_1.json: JSON data data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_3_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DBImporter_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_8_input2.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderSuperHirn_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerLabeled_1_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_9_input2.traML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_20_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_3_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_12_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_1_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_19_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SpecLibSearcher_1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_12_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/Sequest.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_1_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out3.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PepNovoAdapter_2_output.model_list.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_1_input2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DecoyDatabase_3_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_sirius_ukn_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_db.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerIterative_1_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_22_input.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_14_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_8_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_15_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_2_output.samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderIdentification_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_RandomAccess_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_output_1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_5_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_4_output.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_3_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_10_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_3_input.protXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_15_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_7_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_10_trafo2.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_6_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_30_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderIdentification_3_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ImageCreator_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out5.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in2.featureXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MRMTransitionGroupPicker_1_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathRTNormalizer_4_output.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_2_out.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/topp/LowMemPeakPickerHiRes_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_XTandem_input2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_21_output.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_25_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_7_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_output_2.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_3_output_conflicts.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_16_output.consensusXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_3_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_2.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_5_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TMTTenPlexMethod_test.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IsobaricAnalyzer_input_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderCentroided_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_1_output2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/CompNovoCID_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_11_output.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in3.mzML.gz: gzip compressed data, was "QualityControl_1_in3.mzML", last modified: Wed Sep 11 13:48:09 2019, max speed, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 2947883 data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_21_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_25_output.pep.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetaboIdent_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderIdentification_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_14.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_3_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PepNovoAdapter_5_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_2_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_5_input_rt1023.331.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerLabeled_2_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_2_input_positive.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMMapping_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_3_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_10_input.edta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/newIDMergerTest1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_5_input_rt2044.334.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AccurateMassSearch_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_consensus_tsv.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_4_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MSGFPlusAdapter_1_out.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/testLib.spidx: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_5_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_3.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CruxAdapter_1_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/LuciphorAdapter_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CruxAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/spectra.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta.pin: X11 SNF font data, MSB first data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/PercolatorAdapter_1_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/NovorAdapter_1_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_4_foutput.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MyriMatchAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_1_in_2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/LuciphorAdapter_1_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/XTandemAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/third_party_tests.cmake: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MSFraggerAdapter_7_opt_out.pepXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_3_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta.index: data data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_2.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/PercolatorAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MyriMatchAdapter_1_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_2_in.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/XTandemAdapter_2_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_5_output.ms: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/LuciphorAdapter_1_input.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_7_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SpectrastAdapter_1_output.pep.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_1_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/testLib.splib: data data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MascotAdapterOnline_1_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/PercolatorAdapter_1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_1_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_1_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_6_output.ms: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_4_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta.psq: data data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_1_in_3.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_1_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_2_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/spectra_comet.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MascotAdapterOnline_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/OMSSAAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_2_output.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_3_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_3_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/PercolatorAdapter_2.osw: SQLite 3.x database, last written using SQLite version 3016000 data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/ginkgotoxin-ms-switching.raw: data data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_3.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_3_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_1_out_1.part1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_4_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_1_in_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.canno: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MSFraggerAdapter_7_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_3_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_5_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/spectra_spectrast.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta.phr: Certificate data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/tandem_break.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_2_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/XTandemAdapter_1_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/OMSSAAdapter_1_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/NovorAdapter_in.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MSGFPlusAdapter_1_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta.psi: data data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/FidoAdapter_4_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/proteins.fasta.psd: data data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/CometAdapter_2_in.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MSFraggerAdapter_8_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_2_out_1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_2_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/SiriusAdapter_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/ginkgotoxin-ms-switching_out.mzML: XML 1.0 document, UTF-8 Unicode (with BOM) text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MSGFPlusAdapter_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/THIRDPARTY/MaRaClusterAdapter_1.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_10_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_2_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/DecoyDatabase_1.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2860_1103_3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTPredict_1_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_10_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PTModel_1_output.additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_40_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_4_trafo1.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FuzzyDiff_3_in1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_2_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_5_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InspectAdapter_4_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_15_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_1_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out7.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MS3_nonHierarchical.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_23_input.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_3_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterSGolay_2_input.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_in1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_15_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_21_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusMapNormalizer_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_OMSSA.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TMTTenPlexMethod_test.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PTPredict_1_input.model: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/InspectAdapter_1_output.modification_list.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FuzzyDiff_1_in1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AccurateMassSearch_1_output.csv: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/Resampler_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_consensus_centroids.wsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_8_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_ids.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_output_4.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_6_out.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_2_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_5_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinResolver_1_input.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMMapping_input.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out5.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_31_remove_collision_energy.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_30_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DecoyDatabase_4_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_22_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_2_input.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_8_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MassCalculator_1_input.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_4_output2.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_10_input.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_11_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_4_input.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_in4.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SequestAdapter_4_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_16_input.edta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out2.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_13_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MzTabExporter_1_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in1.featureXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_5_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_4_output.samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ExternalCalibration_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/InternalCalibration_2_out_lockmass.dta2d: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_1_output2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_8_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_3_output.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_10_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_16_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_12_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_3_out.mgf: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_deconv_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_input2.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_38_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_21_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_14_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_5_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ImageCreator_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_1035_1178_4.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_2_input.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_3_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_1_out.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_1_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_7_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/newIDMergerTest2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_4_output.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_4_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_8_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_2_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterGaussian_2_input.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_1_design.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_3070_1191_3_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_11_input.mzML: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_3_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DecoyDatabase_2_out.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PrecursorIonSelector_features.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_7_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinder_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/DTAExtractor_1_output.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_5_input.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_13_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AMS_NegativeAdducts.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_18_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpecLibSearcher_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_9_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_2_input1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_1_output2.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out4.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_input3.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathRTNormalizer_4_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_24_output.consensusXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_12_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinder_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_7_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_2_output2.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_37_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_10_input.pepXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out5.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_16_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_9_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/openswath_tmpfile_ms1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TMTElevenPlexMethod_test.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_2_input.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_4_output.additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test2.trie: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_5_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MascotAdapter_2_input.mascotXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_in2.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_mod_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_3.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathConfidenceScoring_1_input.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_OMSSA_output2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_5_input.model_additional_parameters.paramXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_dc_input3.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_5_input.idXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_7_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathConfidenceScoring_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_23_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_5b_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDSplitter_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_4_input.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_1.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AMS_PositiveAdducts.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_3_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_28_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_1_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_11_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_7_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_input.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_2_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_Mascot_input2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in3.featureXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_input_2.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_15_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_8_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_5.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_bad_data_out.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_31_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTraMLToTSV_output_2.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_18_output.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_3_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_rt.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_4_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_5_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_15_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_2_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_9_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_20_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MassTraceExtractor_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_10_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_8_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ffm_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_1_input.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_6_input2.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/neg_mz.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/empty_scan.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/empty.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/empty.fasta: empty data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/PPHiRes_invalidParamName.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/PPHiRes_invalidValue.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/neg_rt.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/neg_rt.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/empty_XML.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/one_scan.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/neg_int.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/neg_mz.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/empty.mzML: empty data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/negValues.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/degenerate_cases/PPHiRes_invalidValueSection.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMetabo_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_9_output.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_3_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_rt.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_3_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderCentroided_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_4_out.mgf: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_Mascot_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_47_input_select.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_6_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_input.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_15_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out3.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMMapping_output_2.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AccurateMassSearch_2_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MascotAdapter_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_3_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NucleicAcidSearchEngine_1.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_3_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderSuperHirn_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_12_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_5_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_3_input.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_2_output2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_2_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in3.trafoXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_5_input_rt889.32.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NucleicAcidSearchEngine_11_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_parameters_noMetaData.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_10_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_14_out.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_6_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_18_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out2.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAssayGenerator_output_2.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MzTabExporter_3_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_47_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ExternalCalibration_1_MS1_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_2_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_28_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_46_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_14_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_1_output.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_8_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_4_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MetaProSIP_1_input.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_3_out.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_24_input.pep.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/SequestAdapter_1_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_XTandem_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_4_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_4_input.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_18_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_12_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_2_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_output.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_14_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_2Dopt_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_3_input.model_additional_parameters.paramXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_1_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_20_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_output_4.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SimpleSearchEngine_1.fasta: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_input_2.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinder_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_1_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_prob_correct_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2860_1103_3_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_1_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_1_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_20_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_b_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMMapping_input_2.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_8_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_3_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TOFCalibration_2_calibrants.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_31_34_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out1.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_13_input.peptides.kroenik: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_3_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpecLibSearcher_1.MSP: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDRipper_2_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_26-2_output.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ams_uku_output.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_5_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_6_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_7_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_20_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DatabaseFilter_3.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_1_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_4_input.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_17_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MzTabExporter_2_input.idXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_9_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/LowMemPeakPickerHiRes_RandomAccess_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/NucleicAcidSearchEngine_1.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_1_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_7_consensus_tsv.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_2_output_positive.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_2_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderIdentification_1_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_6_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_5c_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Decharger_input.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_6_output.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_11_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_7_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_4_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PepNovo.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_14_output2.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_6_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_9_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_output2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_7_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_6_input.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_3_output.additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/.gitattributes: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_2_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/INIUpdater_3_old.toppas: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_4_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_4_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_5_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_1_input.fas: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_14_output.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderRaw_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/DecoyDatabase_4.fasta: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/TMTElevenPlexMethod_test.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_4_input.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_17_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_output_2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/CompNovoCID_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MassTraceExtractor_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterWindowMower_1_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MetaProSIP_1_output_2.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_9_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_deconv_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_1_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_11_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MRMTransitionGroupPicker_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_6_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_5_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_input2.fasta: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathRTNormalizer_1_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_2_output.additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_5_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapNormalizer_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_out.consensusXML: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_7_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_3_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_4_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderSuperHirn_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDScoreSwitcher_2_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_7_input_Skyline.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ImageCreator_2_output.bmp: PC bitmap, Windows 3.x format, 20 x 15 x 24, image size 900, resolution 3937 x 3937 px/m, cbSize 954, bits offset 54 data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_4_input.mrm: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_13_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_35_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_5_input1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_OMSSA_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_1_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_5_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_7_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MascotAdapter_1_input.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_7_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_11_input.tsv: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/NoiseFilterGaussian_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MRMTransitionGroupPicker_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_ffm_output.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinResolver_1_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_4_input.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerIdentification_5_output2.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_5_input2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/RNPxlSearch_4_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_3_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_4_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeptideIndexer_2.fasta: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/GNPSExport_merged.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_21_input.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_6_input.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTPredict_5_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeled_2_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_Mascot_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_5_input1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapNormalizer_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_34_select_isolation_window.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDPosteriorErrorProbability_XTandem_output2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_8_input1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Decharger_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_1_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_3_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_7_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MassTraceExtractor.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_9_output.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_5_input3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_48_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_5_input.mzDat: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXLLF_output.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MzMLSplitter_output_part2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_1_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PepNovoAdapter_1_output.modification_list.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SimpleSearchEngine_1_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/InspectAdapter.out: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Epifany_1_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MetaProSIP_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_11_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_28_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_22_output.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileInfo_5_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_2_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PepNovoAdapter_5_output.pepnovo_out: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_4_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledKD_dc_input1.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/ConsensusID_3_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_9_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerWavelet_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinResolver_1_output1.txt: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/IDMapper_4_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathAnalyzer_9_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_10_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_3_design.tsv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FalseDiscoveryRate_6_output.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SeedListGenerator_2_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_19_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_13_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2810_1091_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/RTModel_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_3_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_16_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathFeatureXMLToTSV_output.long.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_11_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/AssayGeneratorMetabo_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FeatureLinkerUnlabeledQT_4_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDConflictResolver_4_output.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_2_output_1.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_2860_1103_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MapRTTransformer_1_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/ProteinInference.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerTreeGuided_1_input3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileConverter_26_output.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MultiplexResolver_2_output_conflicts.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathMzMLFileCacher_1_output_2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_12_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/Inspect_FASTAFile_test5.index: data data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_3_output.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/InclusionExclusionListCreator_4.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/ConvertTSVToTraML_2_input.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_2_consensus_elements.wsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FeatureFinderMultiplex_5_output.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TargetedFileConverter_13_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_3_input2.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_1_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_11_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerPoseClustering_1_output3.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_21_input.idXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_2_input1.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/SequestAdapter_1_output.modification_list.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathDecoyGenerator_input_3.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/QualityControl_1_in1.mzML.gz: gzip compressed data, was "QualityControl_1_in1.mzML", last modified: Wed Sep 11 13:48:09 2019, max speed, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 3508612 data/openms-2.5.0+cleaned1/src/tests/topp/NucleicAcidSearchEngine_12_out.mzTab: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/DTAExtractor_1_input.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/PeakPickerHiRes_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/HighResPrecursorMassCorrector_1035_1178_4.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/IDFileConverter_20_input.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/FileFilter_10_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/FileMerger_4_input1.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/TextExporter_5_output_peptides.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDFilter_15_input.fasta: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/MetaProSIP_1_output_1.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_13_output.chrom.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/XFDR_test_out7.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/MSstatsConverter_2_design.tsv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/topp/SpectraFilterWindowMower_2_parameters.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/IDMerger_2_input2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/MapAlignerSpectrum_1_input3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/ProteinQuantifier_2_output1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathWorkflow_21_input.irt.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/topp/OpenSwathChromatogramExtractor_4_output.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/topp/OpenPepXL_output.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/external/README.md: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/external/CMakeLists.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/external/ExampleLibraryFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/external/TestExternalCode.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/external/ExampleLibraryFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openswathalgo/MRMScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openswathalgo/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openswathalgo/Scoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openswathalgo/DiaHelpers_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openswathalgo/Datastructures_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openswathalgo/TestConvert.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/include/OpenMS/test_config.h.in: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IndexedMzMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Multithreading_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Deisotoper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OMSSAXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakWidthEstimator_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakPickerMRM_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StopWatch_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusMapNormalizerAlgorithmQuantile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/INIUpdater_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureGroupingAlgorithmLabeled_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeatureQC_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusIDAlgorithmPEPIons_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SqrtMower_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompNovoIdentificationCID_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVTermList_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SplinePackage_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IBSpectraFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassTrace_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentAlgorithmTreeGuided_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Param_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IonizationSimulation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChromatogramExtractorAlgorithm_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/File_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TwoDOptimization_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PepXMLFileMascot_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsobaricQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SVMWrapper_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSDataChainingConsumer_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ControlledVocabulary_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IonMobilityScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompNovoIonScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ClusterAnalyzer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XMassFile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ComplementFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SvmTheoreticalSpectrumGeneratorSet_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexSatelliteProfile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/InspectOutfile_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FASTAContainer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ClusterFunctor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMBatchFeatureSelector_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Base64_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SwathWindowLoader_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IdentificationHit_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzDataFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakSpectrumCompareFunctor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SteinScottImproveScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Digestion_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MathFunctions_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexFilteredPeak_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GaussFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SplineInterpolatedPeaks_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ContinuousWaveletTransform_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PepNovoOutfile_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OptimizePeakDeconvolution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TargetedSpectraExtractor_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureGroupingAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IMSAlphabetTextParser_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LibSVMEncoder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConvexHull2D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentTransformer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeptideIndexing_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PepXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OMSSACSVFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NonNegativeLeastSquaresSolver_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PercolatorOutfile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SavitzkyGolayFilter_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Feature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IMSIsotopeDistribution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDConflictResolverAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MasstraceCorrelator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeptideHit_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AverageLinkage_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/String_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassTraceDetection_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GaussFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MaxLikeliFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeatureFinderScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FASTAFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassExplainer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RTAlignment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PepNovoInfile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSChromatogram_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StandardTypes_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BasicProteinInferenceAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpecArrayFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DocumentIDTagger_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSDataCachedConsumer_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Factory_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TMTTenPlexQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaInfoRegistry_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FineIsotopeDistribution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeatureSelector_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FastLowessSmoothing_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentEvaluationAlgorithmPrecision_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DeNovoIdentification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentEvaluationAlgorithmRecall_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ToolDescriptionFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TraMLValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSDataStoringConsumer_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NNLS_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ItraqConstants_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NASequence_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StatisticFunctions_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationDescription_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMMapping_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GridSearch_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BiGaussModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentAlgorithmIdentification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RangeUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Exception_Base_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConstRefVector_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzDataValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BaseModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Residue_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ElementDB_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PosteriorErrorProbabilityModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsobaricQuantifier_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakIntensityPredictor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MatchedIterator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChromeleonFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentAlgorithmSpectrumAlignment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Peak1D_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeModel_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Identification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumAlignment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IonDetector_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzCalibration_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzMLValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BaseGroupFinder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EmgGradientDescent_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DIAHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XQuestResultXMLFile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureGroupingAlgorithmUnlabeled_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/InclusionExclusionList_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathTestHelper.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/QCBase_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDRipper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenPepXLAlgorithm_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MsInspectFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TIC_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureGroupingAlgorithmKD_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSSim_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CoarseIsotopeDistribution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MorphologicalFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MissedCleavages_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexFilteringProfile_test.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderAlgorithmIsotopeWavelet_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IncludeExcludeTarget_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeptideAndProteinQuant_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SiriusFragmentAnnotation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderAlgorithmPicked_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SignalToNoiseEstimator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SingletonRegistry_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SvmTheoreticalSpectrumGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MascotRemoteQuery_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzQuantMLValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ModelDescription_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CubicSpline2d_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FuzzyStringComparator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/QuantitativeExperimentalDesign_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ILPDCWrapper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/WeightWrapper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassDecomposer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AhoCorasickAmbiguous_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Element_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/UnimodXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProtXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakIntegrator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ElutionPeakDetection_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderIdentificationAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ExperimentalDesign_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NucleicAcidSpectrumGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ClusterHierarchical_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathScores_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MorpheusScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FileHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Histogram_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RTSimulation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TMTSixPlexQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SwathMapMassCorrection_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RangeManager_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AbsoluteQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OnDiscMSExperiment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BaseSuperimposer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexSatelliteCentroided_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RANSACModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVReference_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransitionPQPFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SampleTreatment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DPeak_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AASequence_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TOFCalibration_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDDecoyProbability_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AAIndex_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzQuantMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DeNovoIonScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IonSource_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FilterFunctor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/UniqueIdInterface_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompNovoIdentificationBase_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PoseClusteringAffineSuperimposer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IdXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AbsoluteQuantitationMethodFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AreaIterator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DPosition_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompleteLinkage_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectraMerger_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Fitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FIAMSScheduler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ROCCurve_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakPickerCWT_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ThresholdMower_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ExperimentalDesignFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BinnedSpectrumCompareFunctor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexFiltering_test.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVMappingTerm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ModifiedPeptideGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ParentPeakMower_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathSpectrumAccessOpenMS_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureDeconvolution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MascotXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakPickerSH_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TICFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MascotGenericFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BinaryTreeNode_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Sample_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMTransitionGroup_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Date_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MZTrafoModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConversionHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakAlignment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompNovoIonScoringCID_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsobaricQuantifierStatistics_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/O18Labeler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMDecoy_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsoleUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DeNovoAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumSettings_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Peak2D_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChromatogramPeak_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectraSTSimilarityScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LowessSmoothing_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProteaseDigestion_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MatrixUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Compomer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SwathFileConsumer_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DIntervalBase_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XQuestScores_test.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaInfoInterface_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StreamHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GzipInputStream_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LinearRegression_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EGHModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChargePair_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ParameterInformation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMAssay_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexDeltaMassesGenerator_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PrecursorIonSelectionPreprocessing_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ItraqFourPlexQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderDefs_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CsvFile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChromatogramTools_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PTMXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ClusterProxyKD_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TargetedExperimentHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Software_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IMSAlphabetParser_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RibonucleotideDB_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentEvaluationAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompNovoIonScoringBase_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVMappingFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EDTAFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumMetaDataLookup_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/QcMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BinnedSpectralContrastAngle_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DTAFile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ResidueDB_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeWavelet_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FactoryBase_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MascotInfile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexClustering_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ResidueModification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ItraqEightPlexQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CalibrationData_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BinnedSpectrum_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexFilteringCentroided_test.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureDistance_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSDataWritingConsumer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GlobalExceptionHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IdentificationData_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ParamXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ClusteringGrid_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LocalLinearMap_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathDataAccessHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PoseClusteringShiftSuperimposer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsobaricNormalizer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AbsoluteQuantitationStandardsFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusIDAlgorithmAverage_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSPGenericFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ModificationDefinition_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LinearInterpolation_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Tagging_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AccurateMassSearchEngine_test.cpp: C++ source, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DataStructures_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusMapMergerAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LevMarqFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ICPLLabeler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IMSAlphabet_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Ms2SpectrumStats_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsobaricIsotopeCorrector_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GaussModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StatsHelpers_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Contaminants_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RNaseDigestion_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/KDTreeFeatureNode_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/VersionInfo_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProteinResolver_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeDiffFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SimpleSVM_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexDeltaMasses_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVMappings_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RANSAC_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeatureFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzMLSqliteSwathHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SequestOutfile_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationModelLowess_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FragmentMassError_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DataValue_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakPickerIterative_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EnzymaticDigestionLogModel_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassDecomposition_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/JavaInfo_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProteaseDB_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DTA2DFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ListUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Bzip2InputStream_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DefaultParamHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OptimizePick_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationModelBSpline_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChromatogramSettings_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TMTSixteenPlexQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakShape_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TheoreticalSpectrumGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ScanWindow_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SILACLabeler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RegressionUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DRange_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LinearResampler_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DataProcessing_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EGHTraceFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeptideEvidence_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ContinuousWaveletTransformNumIntegration_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/InspectInfile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IMSDataConsumer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BiGaussFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumLookup_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSstatsFile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SimpleTSGXLMS_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Instrument_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsobaricChannelExtractor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/KroenikFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/UniqueIdGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Precursor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProductModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GumbelDistributionFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DIAScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CrossLinksDB_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFragmentSelection_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NeutralLossDiffFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TraMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ISpectrumAccess_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ComplementMarker_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TheoreticalSpectrumGeneratorXLMS_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Ribonucleotide_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaInfoDescription_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SemanticValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeMarker_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SysInfo_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumAlignmentScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/KDTreeFeatureMaps_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDMapper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Normalizer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Map_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XTandemXMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DIAPrescoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeptideIdentification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Scaler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Ms2IdentificationRate_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EGHFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RichPeak2D_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ReactionMonitoringTransition_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusIDAlgorithmRanks_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumAnnotator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RealMassDecomposer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakPickerHiRes_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMRTNormalizer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SequestInfile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzTabFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeaturePickerFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzTab_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ClassTest_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Product_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumAddition_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OPXLSpectrumProcessingAlgorithms_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProtonDistributionModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakTypeEstimator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompressedInputSource_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DateTime_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SwathFile_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/HDF5_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NoopMSDataConsumer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransitionTSVFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GzipIfstream_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DetectabilitySimulation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFindingMetabo_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StringListUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ZlibCompression_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignerBase_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NLargest_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BilinearInterpolation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CachedMzMLHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RawTandemMSSignalSimulation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DigestSimulation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PSProteinInference_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AbsoluteQuantitationStandards_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConfidenceScoring_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSNumpress_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RNPxlModificationsGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusMapNormalizerAlgorithmThreshold_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IndexedMzMLFileLoader_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ModifiedNASequenceGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ZhangSimilarityScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FileWatcher_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/HyperScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Modification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Weights_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/InstrumentSettings_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DocumentIdentifier_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EmpiricalFormula_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IdentificationDataConverter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BSpline2d_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexFilteredMSExperiment_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SvmTheoreticalSpectrumGeneratorTrainer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeDistributionCache_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GridFeature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVTermListInterface_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSQuantifications_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderAlgorithmMRM_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumAccessSqMass_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Tagger_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StringUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFileOptions_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LPWrapper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeDistribution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GaussTraceFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AbsoluteQuantitation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SimpleSearchEngineAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LinearResamplerAlign_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumHelpers_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaboliteSpectralMatching_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GaussFilterAlgorithm_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSExperiment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzMLSpectrumDecoder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathMRMFeatureAccessOpenMS_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TargetedExperiment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ExperimentalSettings_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DataAccessHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/StablePairFinder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzIdentMLFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/HPLC_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Acquisition_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderMultiplexAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureGroupingAlgorithmQT_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSDataTransformingConsumer_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DBoundingBox_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMTransitionGroupPicker_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaInfo_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GoodDiffFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BasicStatistics_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TMTElevenPlexQuantitationMethod_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSPFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusFeature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TextFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ExtendedIsotopeModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PSLPFormulation_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CachedMzML_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaInfoInterfaceUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureMap_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CompNovoIdentification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumAccessQuadMZTransforming_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GridBasedCluster_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureHandle_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OPXLDataStructs_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenSwathScoring_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XTandemInfile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/QTClusterFinder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TraceFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LogConfigHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakPickerMaxima_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/UniqueIdIndexer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AveragePosition_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OpenPepXLLFAlgorithm_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeatureScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentAlgorithmPoseClustering_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SVOutStream_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EmgScoring_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FalseDiscoveryRate_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/QuadraticRegression_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MS2File_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BayesianProteinInferenceAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeatureQCFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Adduct_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BinnedSharedPeakCount_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LabeledPairFinder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SingleLinkage_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OfflinePrecursorIonSelection_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SeedListGenerator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzMLSqliteHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ComparatorUtils_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ElutionModelFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDBoostGraph_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Matrix_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IndexedMzMLDecoder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSNumpressCoder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IntegerMassDecomposer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BinnedSumAgreeingIntensities_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ToolHandler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/HiddenMarkovModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SwathQC_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DigestionEnzymeProtein_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EuclideanSimilarity_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PScore_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassAnalyzer_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumIdentification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusMap_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MultiplexIsotopicPeakPattern_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SimplePairFinder_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EnzymaticDigestion_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MassDecompositionAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ITRAQLabeler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PercolatorFeatureSetHelper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/NeutralLossMarker_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RANSACModelLinear_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AsymmetricStatistics_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusMapNormalizerAlgorithmMedian_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMFeaturePicker_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakIndex_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/AcquisitionInfo_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BernNorm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSDataAggregatingConsumer_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EmgModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XMLValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProteinIdentification_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MSSpectrum_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MetaboliteFeatureDeconvolution_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ModificationDefinitionsSet_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ChromatogramExtractor_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IMSElement_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BaseFeature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/BaseLabeler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ExtendedIsotopeFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SignalToNoiseEstimatorMedian_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PrecursorPurity_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVMappingRule_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ModificationsDB_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ContactPerson_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakMarker_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MRMIonSeries_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DeNovoPostScoring_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FIAMSDataProcessor_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusIDAlgorithmBest_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GridBasedClustering_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Gradient_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TOPPBase_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumCheapDPCorr_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PeakFileOptions_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/EmgFitter1D_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GaussFilter_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PrecursorCorrection_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeWaveletTransform_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsotopeDistributionMIDAS_test.cpp: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ListUtilsIO_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SourceFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SignalToNoiseEstimatorMeanIterative_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RANSACModelQuadratic_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FeatureFinderAlgorithmPickedHelperStructs_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/CVTerm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/FileTypes_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ProteinHit_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/WindowMower_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusIDAlgorithmPEPMatrix_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SpectrumPrecursorComparator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IntensityBalanceFilter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/XFDRAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/HashGrid_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/Bzip2Ifstream_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SqMassFile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/OPXLHelper_test.cpp: C source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MzIdentMLValidator_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ConsensusIDAlgorithmWorst_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/PrecursorIonSelection_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/QTCluster_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IsoSpec_test.cpp: C++ source, UTF-8 Unicode text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationModelInterpolated_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MapAlignmentAlgorithmKD_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/MarkerMower_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/TransformationModelLinear_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/InterpolationModel_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/SignalToNoiseEstimatorMedianRapid_test.cpp: C++ source, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/IDMergerAlgorithm_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/ToolDescription_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/GammaDistributionFitter_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LogStream_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DistanceMatrix_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/RawMSSignalSimulation_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/LabelFreeLabeler_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/DataFilters_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/source/InternalCalibration_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_reannotateTransitions_output_2.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LPWrapper_test_integer.mps: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MSPGenericFile_input.msp: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IdXMLFile_no_proteinhits.idXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PILISSequenceDB_DFPIANGER_1.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandemInfile_test.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DummyExtender_region1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_3.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_uncompresscor.MzML.gz: gzip compressed data, was "MzMLFile_6_uncompressed.mzML", last modified: Thu Oct 8 07:15:35 2009, from Unix, original size modulo 2^32 37397 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MetaboliteFeatureDeconvolution_test.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_2_boost58.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotXMLFile_test_2.mascotXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TransformationXMLFile_3.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_3_boost58.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RTSimulation_absolut_rt.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test2.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_5.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/GzipIfStream_1_corrupt.gz: gzip compressed data, was "Bzip2IfStream_1", last modified: Wed Oct 28 16:48:01 2009, from Unix, original size modulo 2^32 30 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakTypeEstimator_rawTOF.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Ascore_test_input1.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_orbitrap.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DummySeederTestData_region2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TransformationModelInterpolated_base_data.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_4_indexed.mzML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MetaboliteFeatureDeconvolution_test_ppm.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SwathWindowFile.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ChromeleonFile_new_header.txt: UTF-8 Unicode (with BOM) text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_3.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzXMLFile_1_compressed.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_db_mapping.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotInfile_test_template3.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleSVM_test_labels.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_uncompressed.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ConsensusXMLFile_1.consensusXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricNormalizer.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IBSpectraFile.ibspectra.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test_extended.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsotopeWaveletSeeder_region2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Masstraces_Testdata.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SuffixArrayTrypticCompressed_test.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SuffixArrayPeptideFinder_test.fasta: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_output2_featureXML.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_2_single_table.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IndexedmzMLFile_2_broken.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzIdentMLFile_whole.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_detectingTransistionCompound_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RTSimulation_absolut_rt.model_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepNovoOutfile.out1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenPepXLLF_input.fasta: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_PTMs.xml: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFindingMetabo_input1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/EDTAFile_test_4.edta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SiriusFragmentAnnotation_test/spectra/1_C12H11Cl2N3O2_M+H+.ms: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SiriusFragmentAnnotation_test/spectra/2_C10H11ClN3O2_M+H+.ms: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SiriusFragmentAnnotation_test/spectrum.ms: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MultiplexClustering.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DTAFile_test.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_ftms_sn4_out.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test2.index: data data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_simulation.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotXMLFile_test_1.mascotXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SvmTheoreticalSpectrumGenerator_test.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PTMs.xml: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_orbitrap_sn4_out_ppmax.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InspectOutfile_test_2.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/BayesianProteinInference_3_test.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TransformationXMLFile_2.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMLValidator.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotXMLFile_test_3.mascotXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MoNA-export-GC-MS_Spectra_reduced_TSE_matchSpectrum.msp: UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MetaboliteFeatureDeconvolution_ppm_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleSVM_test_xval.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/BayesianProteinInference_test.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InternalCalibration_2_lock.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_reannotateTransitions_output_3.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PSProteinInference_test_input.iDXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PickedPeakTestData.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RawTandemMSSignalSimulation_with_ms2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RTSimulation.svm_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Sequest_PTMs.xml: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_ftms.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMLValidator_missing_attribute.xml: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_r.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOPPBase_test_write_ini_out.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Transformers_tests_2.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IdXMLFile_whole.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_ftms_sn1_out.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/newMergerTest_out.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDFilter_test2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SequestOutfile.out1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_5.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandem_rev_ids_withProtScores.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_1.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_output_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DetectabilitySimulation.svm: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMDecoyGenerator_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Sequest_test2.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_3_out.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InspectOutfile_test_1.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenSwath_generic_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_3_minutes_out.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpecArrayFile_test_2.peplist: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_3.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricChannelExtractor_6.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SignalToNoiseEstimatorMeanIterative_test.out: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_3_invalid.mzML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_2.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelectionPreprocessing_rt.model_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TransformationXMLFile_1.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMFeatureQCFile_2.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ProtXMLFile_input_1.protXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/20171013_HMP_C61_ISO_P1_GA1_UV_VIS_2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TextFile_test_infile.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzIdentML_XLMS_labelled.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_orbitrap_ppmax.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerCWT_test.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_16.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SwathFile.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test2.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureXMLFile_2_options.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOPPBase_test_write_ini_subsec_out.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Transformers_tests.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MarrWaveletSeeder_region3: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_uncompressed.mzML.gz: gzip compressed data, was "MzMLFile_6_uncompressed.mzML", last modified: Thu Oct 8 07:15:35 2009, from Unix, original size modulo 2^32 37397 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFileMascot_test.pepXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test_output.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ConsensusXMLFile_2_options.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmIdentification_test_1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMFeatureQCFile_1.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzDataFile_4_64bit.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PercolatorOutfile_test.psms: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureDecharger_TestData.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SemanticValidator_valid.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Param_post16_update.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotInfile_test_template1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_ftms_sn0_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelection_ids.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/File_test_empty.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectrumAlignment_in2.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MS2File_test_spectra.ms2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SqliteMassFile_1.sqMass: SQLite 3.x database, last written using SQLite version 3011000 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Bzip2IfStream_1.bz2: bzip2 compressed data, block size = 900k data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/comet.topperc.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_2_minimal.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MarrWaveletSeeder_region2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SequestOutfile_headerfile.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenSwath_identification_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MarrWaveletSeeder_region1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMLValidator_missing_element.xml: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ProtXMLFile_input_2.protXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SemanticValidator_cv.obo: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OfflinePrecursorIonSelection_raw_data.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FastaIterator_test.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SignalToNoiseEstimator_test.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SemanticValidator_corrupt.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MSPFile_test.msp: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzIdentMLFile_msgf_mini.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricChannelExtractor_7.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OMSSAXMLFile_test_1.xml: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_orbitrap_sn0_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzTabFile_iTRAQ.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricQuantifier.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test.trie: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Ascore_test_input2.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_4.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_orbitrap_sn4_out.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDFilter_test4.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ToyExample1.traML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_1.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_5.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XFDRAlgorithm_input.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotXMLFile_test_out_3.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_1r.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMLValidator_valid.xml: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_restrictTransitions_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Schema2CV.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_output1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_unreadable_unwriteable.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PickedPeakSeeder_region1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SemanticValidator_mapping.xml: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepNovo_unreadable_unwriteable.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/EDTAFile_test_3.edta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Gumbel_1D.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_output_4.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_db_struct.tsv: ASCII text, with no line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_1_single_table.tsv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzIdentML_XLMS_unlabelled.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ChromeleonFile_commas.txt: UTF-8 Unicode (with BOM) text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOPPBase_toolcommon.ini: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AbsoluteQuantitationMethodFile_in_1.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectrumAlignment_in1.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DummySeederTestData_region1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricIsotopeCorrector.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LPWrapper_test.mps: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DTA2DFile_test_1.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_1.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test_calibrants2.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFinderMultiplex_1_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test_out.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOPPBase_empty.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenPepXL_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotInfile_test.mascot_in: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_2.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MetaboliteFeatureDeconvolution_neg_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ElutionPeakDetection_input1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzDataFile_1.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PScore_test.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/EDTAFile_test_2.edta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test2.trie: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_reannotateTransitions_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorPurity_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerCWT_test_output.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_4_boost58.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_4.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_positive_adducts.tsv: ASCII text, with no line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_6.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_4.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ChromatogramExtractor_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleExtender_region1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SequestOutfile2.out: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SuffixArrayTrypticSeqan_test.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_uncompressed.mzML.bz2: bzip2 compressed data, block size = 900k data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/BayesianProteinInference_2_test.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_output1_consensusXML.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RawTandemMSSignalSimulation_no_ms2.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/header_file.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/BSA.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InternalCalibration_2_lockmass.mzML.gz: gzip compressed data, was "InternalCalibration_2_lockmass.mzML", last modified: Fri Apr 22 08:14:38 2016, max speed, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 824078 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorCorrection_out.csv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TrypticIterator_test.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ProteinInference.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/StreamHandler_test.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_5.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ElutionModelFitter_test.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_3.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_input/SerumTest_merged.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_input/SerumTest_picked.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_input/SerumTest.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_input/params_test.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_output_precursor.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DTA2DFile_test_3.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/msgf.topperc_check.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/GaussMix_2_1D.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFinderAlgorithmPicked.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MSInspectFile_test_1.msi: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_ftms_ppmax.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test_out_1.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_2_minutes_out.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelection_db.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/KroenikFile_test_2.krf: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMFeatureSelector_100ug.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TransformationXMLFile_4.trafoXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_6_out1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test_store.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmPoseClustering_in2.mzML.gz: gzip compressed data, was "MapAlignmentAlgorithmPoseClustering_in2.mzML", last modified: Thu Nov 11 15:48:36 2010, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 8682132 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Sequest.mzXML.13.1.d.out: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_reannotateTransitions_output_1.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMFeaturePickerFile.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/GumbelGaussMix_2_1D.csv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleExtender_region2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsotopeWaveletSeeder_region1: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleExtender_test2.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_ftms_sn4_out_ppmax.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TextFile_test_empty_infile.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OPXLHelper_test.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFinderMultiplex_1_parameters.ini: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DetectabilitySimulation.svm_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IndexedmzMLFile_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandem_fwd_ids.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FileHandler_MGFbyContent2.mgf: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/xtandem.topperc_check.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepXMLFile_test_out_mzML.pepxml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/20171013_HMP_C61_ISO_P1_GA1_UV_VIS_2.txt: UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RTSimulation.svm: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMDecoyGenerator_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IBSpectraFile.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Sequest_unreadable_unwriteable.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_3_out2.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelection_features.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MultiplexFiltering.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzXMLFile_4_long.mzXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RTSimulation.svm_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/EDTAFile_test_1.edta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandemInfile_test_write.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MarrWaveletTestData.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_negative_adducts.tsv: ASCII text, with no line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MassTraceDetection_input1.mzML: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmIdentification_test_2.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ProteinQuantifier_input.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MascotInfile_test_template2.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraSTSimilarityScore_1.msp: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Schema2CV.obo: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricQuantifier_out.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmTreeGuided_test_in0.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_5_boost58.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TargetedSpectraExtractor_matchSpectrum_GCMS.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/newIDMergerTest1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SuffixArrayPeptideFinder_test.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TransformationModelInterpolated_gsl_data.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_6_out3.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpecArrayFile_test_1.peplist: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzTabFile_SILAC.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ProteinQuantifier_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFindingMetabo_output1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MetaboliteFeatureDeconvolution_pos_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/EDTAFile_test_out_1.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FalseDiscoveryRate_OMSSA.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzDataFile_3_minimal.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MorphologicalFilter_test_1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PickedPeakSeeder_region2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricIsotopeCorrector_out.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DummySeederTestData.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepNovoOutfile.out: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenPepXL_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Mascot_MSMS_example.mzid: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepNovoOutfile.out2: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmPoseClustering_in1.mzML.gz: gzip compressed data, was "MapAlignmentAlgorithmPoseClustering_in1.mzML", last modified: Thu Nov 11 15:48:44 2010, from FAT filesystem (MS-DOS, OS/2, NT), original size modulo 2^32 8476051 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LabeledPairFinder.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test_data.txt: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureDeconvolution_easy_input.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzXMLFile_3_64bit.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/xtandem.topperc.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Schema2CV_2.obo: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsotopeWaveletSeeder_region4: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_input_3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/combined.concat.perco.in.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/reducedHMDBMapping.tsv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmTreeGuided_test_in1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/newIDMergerTest2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepNovoOutfile_version_file.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentEvaluationAlgorithm_gt.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_compressed.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test_calibrant_masses.txt: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DTA2DFile_test_2.dta2d: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_empty_file.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsotopeWaveletTransform_test.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_input_4.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Param_pre16_update.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XQuestResultXMLFile_test_data.xquest.xml: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ChromatogramExtractor_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/clusterexperiment.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Sequest_test.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureDeconvolution_easy_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Ascore_test_input3.dta: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_1.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RawTandemMSSignalSimulation_no_ms2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/fid: data data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/acqus: data data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/acqu: data data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/sptype: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/pdata/1/1r: data data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/pdata/1/procs: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMassFile_test/pdata/1/proc: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IndexedmzMLFile_3_broken.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LogStream_test_setPrefix.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzTabFile_labelfree.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzTabFile_SILAC2.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzXMLFile_1.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/class_test_template.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TwoDOptimization.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PepNovoInfile_test_template.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandem_fwd_ids_withProtScores.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelectionPreprocessing_rt.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsotopeWaveletSeeder_region3: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzDataFile_2_long.mzData: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/BSpline2d_test_sinus.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/class_test_infile.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureXMLFile_3_old.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/neg_mz.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/empty_scan.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/empty.idXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/empty.fasta: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/neg_rt.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/neg_rt.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/empty_XML.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/one_scan.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/neg_int.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/neg_mz.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/empty.mzML: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/degenerate_cases/negValues.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandemXMLFile_test.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AbsoluteQuantitationMethodFile_in_2.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentAlgorithmTreeGuided_test_in2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_input1.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenPepXL_input.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMFeatureSelector_150601_0_BloodProject01_PLT_QC_Broth-1_1_reduced.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SuffixArraySeqan_test.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_3_out1.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LogStream_test_caching.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TargetedSpectraExtractor_matchSpectrum_traML.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_2.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SvmTheoreticalSpectrumGenerator_test_boost58.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OptimizePeakDeconvolution.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SequestOutfile.out: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/CsvFile_1.csv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzTabFile_Cytidine.mzTab: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_d.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_orbitrap_sn1_out.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ControlledVocabulary.obo: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleSVM_test_predictors.txt: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AbsoluteQuantitationStandardsFile.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_c.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_detectingTransitions_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ExperimentalDesign_input_3.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricNormalizer_out.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/combined.merge.perco.in.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MapAlignmentEvaluationAlgorithm_in.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test_calibrants.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test.index: data data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFinderAlgorithmMRM_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakTypeEstimator_raw.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/KroenikFile_test_1.krf: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsobaricChannelExtractor_8.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/HiddenMarkovModel_test.graphML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_input1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_input_precursor.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FASTAFile_test.fasta: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelectionPreprocessing_db.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ParamXMLFile_test_writeXMLToStream.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_output_1_boost58.TraML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_5_out1.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MetaboliteFeatureDeconvolution_easy_output.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Matrix_test_nr.pgm: Netpbm image data, size = 24 x 7, greymap, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/reducedHMDB2StructMapping.tsv: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TargetedSpectraExtractor_13CFlux_TraML.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/.gitattributes: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOFCalibration_test_output2.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakPickerHiRes_spectrum_selection.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_2_out.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DummyExtenderTestData.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_1_minutes_out.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_restrictTransitions_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/CsvFile_2.csv: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IdentificationDataConverter_out.mzTab: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/comet.topperc_check.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandem_rev_ids.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/msgf.topperc.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_6_out2.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDFilter_test3.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XTandemXMLFile_test_2.xml: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FileHandler_toppas.toppas: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/RTSimulation_absolut_rt.model: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SpectraMerger_input_2.mzML: XML 1.0 document, ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenSwath_generic_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/GzipIfStream_1.gz: gzip compressed data, was "Bzip2IfStream_1", last modified: Wed Oct 28 16:48:01 2009, from Unix, original size modulo 2^32 30 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InspectInfile_test_template1.txt: SPEC data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OMSSACSVFile_test_1.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMFeatureSelector_BloodProject01_SWATH.csv: CSV text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FileHandler_MGFbyContent1.mgf: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_input_1.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IsotopeWaveletTestData.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IdXML_XLMS_labelled.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureFinderAlgorithmPicked.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OfflinePrecursorIonSelection_features.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzIdentML_3runs.mzid: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_uisTransitions_input_3.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/OpenPepXLLF_input.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SignalToNoiseEstimatorMedian_test.out: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_1_out.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDFilter_test.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOPPBase_common.ini: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/File_test_text.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LPWrapper_test.lp: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/ProteinQuantifier_input.consensusXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FIAMS_output/.gitkeep: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Ascore_test_input4.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/XMLValidator_syntax.xml: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PrecursorIonSelectionPreprocessing_rt.model_samples: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_5_long.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Inspect_test1.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/FeatureXMLFile_1.featureXML: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDMapper_4.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_uncompresscor.bz2: bzip2 compressed data, block size = 900k data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TargetedSpectraExtractor_13C1_spectra0to100.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/TOPPBaseCmdParseSubsectionsTest.ini: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SequestInfile_test_template1.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/PeakTypeEstimator_peak.dta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LibSVMEncoder_test.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_detectingTransitionCompound_output.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MRMAssay_detectingTransitions_input.TraML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/AccurateMassSearchEngine_output1_featureXML.mzTab: ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/Bzip2IfStream_1_corrupt.bz2: bzip2 compressed data, block size = 900k data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/SimpleExtender_test.mzData: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzXMLFile_2_minimal.mzXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LogStream_test_general.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/InclusionExclusionList_1.fasta: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/IDBoostGraph_test_in.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/cv_mapping_test_file.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/DetectabilitySimulation.svm_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/LogConfigHandler_test_general.txt: empty data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/data/MzMLFile_6_uncompressedcorrupt.mzML.gz: gzip compressed data, was "MzMLFile_6_uncompressed.mzML", last modified: Thu Oct 8 07:15:35 2009, from Unix, original size modulo 2^32 37397 data/openms-2.5.0+cleaned1/src/tests/class_tests/openms/executables.cmake: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/test_config.h.in: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnMS2Fragment_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnFT_PeakDetectController_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnMS1_feature_merger_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnMS2Info_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnCentroidPeak_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnRawData_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/Superhirn_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnIsotopicDist_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnBackgroundIntensityBin_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnfeatureLCprofile_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnLC_MS_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnBackgroundControl_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/Superhirnfeature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnLC_elution_peak_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnconsensIsotopePattern_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnDeisotoper_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnLCMSCData_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnClusteredMS2ConsensusSpectrum_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnMS2ConsensusSpectrum_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/Superhirnms_peak_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnMS2_feature_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnCentroidData_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/source/SuperhirnProcess_Data_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/superhirn/data/FeatureFinderAlgorithmSH_input.mzData: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/src/tests/class_tests/openms_gui/include/GUI/TOPPView_test.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms_gui/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms_gui/source/GUI/TOPPView_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms_gui/source/MultiGradient_test.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/src/tests/class_tests/openms_gui/source/AxisTickCalculator_test.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/CODE_OF_CONDUCT.md: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/IDPool/README: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/IDPool/IDPool.txt: empty data/openms-2.5.0+cleaned1/share/OpenMS/DESKTOP/TOPPView.appdata.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/DESKTOP/TOPPView.desktop: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/DESKTOP/readme.txt: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/DESKTOP/TOPPAS.appdata.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/DESKTOP/TOPPAS.desktop: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_2.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzXML_3.1_mod.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/TrafoXML_1_1.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_2.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/IdXML_1_5.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/IdXML_1_1.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzData_1_05.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_3.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzQCML_0_0_5.xsd: exported SGML document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_7_0.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzML_1_10.xsd: XML 1.0 document, ISO-8859 text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/xQuest_1_0.xsd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzXML_3.1.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF, CR line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_6_2.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_4.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/CvMapping.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/IdXML_1_3.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_3.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/TraML0.9.3.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FuGElightv1.0.0.xsd: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzIdentML1.0.0.xsd: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_7.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_8.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_0.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/IdXML_1_2.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_7.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_1.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzML_1_00.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_5.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_6.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_2.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_1.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_0.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/CTD_0_3.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/IdXML_1_4.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/qcML_0.0.7.xsd: exported SGML document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzML_idx_1_00.xsd: XML 1.0 document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/separation_technique_1.0.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/general_types_1.0.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_1.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/TrafoXML_1_0.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/Param_1_4.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_4.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/protXML_v6.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_3.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_6.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzQuantML_1_0_0-rc2.xsd: XML 1.0 document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_5.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzXML_2_1.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF, CR line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzXML_idx_3.1.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/IdXML_1_0.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/FeatureXML_1_9.xsd: XML 1.0 document, UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzML_idx_1_10.xsd: XML 1.0 document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/pepXML_v114.xsd: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/mzIdentML1.1.0.xsd: exported SGML document, UTF-8 Unicode (with BOM) text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ConsensusXML_1_0.xsd: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/TraML1.0.0.xsd: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/SCHEMAS/ToolDescriptor_1_0.xsd: XML 1.0 document, UTF-8 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/MAPPING/ms-mapping.xml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/MAPPING/mzIdentML-mapping.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/MAPPING/TraML-mapping.xml: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/MAPPING/mzdata-mapping.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/PIP/linearMapping.data: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/PIP/codebooks.data: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_mzTab2tsv_PRT.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_qcfigures_setid.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/QCExporter.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/LINUX/TPP_ProteinProphet.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/LINUX/mail.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_qcfigures_trapfill.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/XTandemToPercolator.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_mzTab2tsv_PEP.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_qcfigures_idmap.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_generic.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Percolator.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Hardkloer.ttd: exported SGML document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/MascotPercolator.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/WINDOWS/TPP_ProteinProphet.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/ReadMe.txt: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/RawDirConvert.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_qcfigures_rt_acc.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_mzTab2tsv_PSM.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_qcfigures_tic.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/msconvert.ttd: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/TPP_RefreshParser.ttd: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/TEMPLATE.ttd_: exported SGML document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/MSGFtoPercolator.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/TOOLS/EXTERNAL/Rscript_qcfigures_acc.ttd: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProduceQCFigures_rt_acc.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/mzTab2tsv_PEP.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProduceQCFigures_acc.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProteomicsLFQ.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProduceQCFigures_inj.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/Rscript_generic_example.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProduceQCFigures_idmap.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProduceQCFigures_tic.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/mzTab2tsv_PSM.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ProduceQCFigures_setid.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/mzTab2tsv_PRT.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/ropenms.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/InternalCalibration_Models.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/InternalCalibration_Residuals.R: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/SCRIPTS/plot_trafo.R: a /usr/bin/env Rscript script, ASCII text executable data/openms-2.5.0+cleaned1/share/OpenMS/GUISTYLE/qtStyleSheet.qss: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/THIRDPARTY/ReadMe.txt: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/Enzymes.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/NegativeAdducts.tsv: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MetaboliteIsoModelNoised5.svm: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MissedCleavage.model: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/PositiveAdducts.tsv: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/XTandem_default_input.xml: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/XLMOD.obo: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/Custom_RNA_modifications.tsv: UTF-8 Unicode text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MetaboliteIsoModel.svm: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/Modomics.tsv: UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/Elements.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/Residues.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/OMSSA_modification_mapping: CSV text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MetaboliteIsoModel.scale: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MetaboliteIsoModelNoised5.scale: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/unimod.xml: XML 1.0 document, UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MetaboliteIsoModelNoised2.svm: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/MetaboliteIsoModelNoised2.scale: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/HMDBMappingFile.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/PSI-MOD.obo: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/Enzymes_RNA.xml: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CHEMISTRY/HMDB2StructMapping.tsv: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_1.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_1_baseline_and_noise_filtered.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/QualityControl.toppas: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/peakpicker_tutorial.toppas: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/BSA_Quantitation.toppas: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta.psd: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta.pin: X11 SNF font data, MSB first data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta.psi: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta.psq: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/BSA_Identification/18Protein_SoCe_Tr_detergents_trace_target_decoy.fasta.phr: Certificate data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta.psq: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta.pog: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta.psi: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta.phr: Certificate data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta.psd: data data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/Identification/target_decoy_Ecoli_K12_TaxID_83333.proteomes.fasta.pin: X11 SNF font data, MSB first data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_2.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_8.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_3.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_4.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_11.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_6.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_9.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_7.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_5.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_12.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_10.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/data/merger_tutorial/rt_1.mzML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/Ecoli_Identification.toppas: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/merger_tutorial.toppas: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/TOPPAS/GenericWrapper_Rscript-generic.toppas: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/QCImporter/additional_tabular_mapping.csv: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/QCImporter/additional_tabular_data.csv: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F1_aligned.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F2_aligned.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F1_aligned.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F1_idmapped.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F2_aligned.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F2_aligned.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F1.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA_design.tsv: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F1_aligned.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F2.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F1_idmapped.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA_linked.consensusXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F1_idmapped.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F2_idmapped.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F2.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA1_F1.idXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F2_idmapped.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA3_F2_idmapped.featureXML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/FRACTIONS/BSA2_F2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_2.ini: XML 1.0 document, ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_1_picked.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_1_baseline_filtered.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/CHROMATOGRAMS/Spyogenes.chrom.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/ID/Ecoli_MS2_small.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/model_11__1_reg.svm: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/SvmMSim.model: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/testModel_11__1_reg.svm: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/SvmModelSet.model: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/DTPredict.model: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/FASTAProteinAbundanceSampling.py: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/README: ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/MSMSim.model: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/contaminants.csv: ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/DTPredict.model_samples: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/testModel_11__1_class.svm: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/RTPredict.model_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/RTPredict.model_samples: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/DTPredict.model_additional_parameters: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/model_11__1_class.svm: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/simulation/RTPredict.model: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/LCMS-centroided.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/LCMS-centroided.featureXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/external_code/README.md: ASCII text, with very long lines, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/examples/external_code/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/external_code/Main.cpp: C source, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/external_code/ExampleLibraryFile.h: C++ source, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/external_code/ExampleLibraryFile.cpp: C++ source, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/BSA3_OMSSA.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/experimental_design.tsv: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/BSA2_OMSSA.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/BSA3.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/BSA1_OMSSA.idXML: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/BSA2.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/BSA/BSA1.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/examples/peakpicker_tutorial_2_picked.mzML: XML 1.0 document, ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CV/brenda.obo: data data/openms-2.5.0+cleaned1/share/OpenMS/CV/quality.obo: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CV/unit.obo: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CV/unimod.obo: UTF-8 Unicode text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CV/qc-cv.obo: ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/CV/psi-mzdata.obo: ASCII text, with very long lines, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/CV/goslim_goa.obo: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/CV/psi-ms.obo: ASCII text, with very long lines data/openms-2.5.0+cleaned1/share/OpenMS/XSL/APML_to_CSV.xsl: XML 1.0 document text (XSL stylesheet), ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/XSL/index.html: HTML document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/XSL/QcML_report_sheet.xsl: XML 1.0 document, ASCII text data/openms-2.5.0+cleaned1/share/OpenMS/XSL/ConsensusXML.xsl: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/share/OpenMS/XSL/IdXML.xsl: XML 1.0 document, ASCII text, with CRLF line terminators data/openms-2.5.0+cleaned1/CHANGELOG_PARAMS: ASCII text, with very long lines data/openms-2.5.0+cleaned1/License.txt: ASCII text data/openms-2.5.0+cleaned1/README: ASCII text data/openms-2.5.0+cleaned1/tools/correct_test.php: PHP script, ASCII text data/openms-2.5.0+cleaned1/tools/OpenSWATH.skyr: XML 1.0 document, ASCII text, with CRLF, LF line terminators data/openms-2.5.0+cleaned1/tools/pychecker_ignore.yaml: ASCII text data/openms-2.5.0+cleaned1/tools/changelog_helper.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/travis/cibuild.before.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/travis/osx-cibuild.before.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/travis/osx-cibuild.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/travis/cibuild.cmake: ASCII text data/openms-2.5.0+cleaned1/tools/travis/cibuild.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/travis/lnx-cibuild.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/travis/lnx-cibuild.before.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/update_header_dates.sh: ASCII text data/openms-2.5.0+cleaned1/tools/convert_featureXML.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/tools/PythonExtensionChecker.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/tools/uncrustify_branch.sh: a /usr/bin/env sh script, UTF-8 Unicode text executable data/openms-2.5.0+cleaned1/tools/ACTIVE_MAINTAINERS: ASCII text data/openms-2.5.0+cleaned1/tools/README: ASCII text data/openms-2.5.0+cleaned1/tools/create_class.rb: Ruby script, ASCII text data/openms-2.5.0+cleaned1/tools/uncrustify.cfg: ASCII text data/openms-2.5.0+cleaned1/tools/templates/source_sources_cmake: ASCII text data/openms-2.5.0+cleaned1/tools/templates/source: C++ source, ASCII text data/openms-2.5.0+cleaned1/tools/templates/header: C++ source, ASCII text data/openms-2.5.0+cleaned1/tools/templates/header_sources_cmake: ASCII text data/openms-2.5.0+cleaned1/tools/quickbuild-osx.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/make_source_package.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/PythonCheckerLib.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/tools/build.bat: DOS batch file, ASCII text data/openms-2.5.0+cleaned1/tools/create_test.php: C++ source, ASCII text data/openms-2.5.0+cleaned1/tools/evaluate_ff.php: PHP script, UTF-8 Unicode text data/openms-2.5.0+cleaned1/tools/scripts/git_showdiff.sh: ASCII text data/openms-2.5.0+cleaned1/tools/scripts/create_im.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/tools/scripts/create_testdata_flqt.py: ASCII text data/openms-2.5.0+cleaned1/tools/scripts/create_sonar.py: Python script, ASCII text executable data/openms-2.5.0+cleaned1/tools/sql2graph.php: PHP script, ASCII text, with very long lines data/openms-2.5.0+cleaned1/tools/MSWindowsOS_OpenMS_file_associations_modify.reg: Little-endian UTF-16 Unicode text, with CRLF line terminators data/openms-2.5.0+cleaned1/tools/jenkins/os_compiler_matrix.tsv: ASCII text data/openms-2.5.0+cleaned1/tools/jenkins/README.MD: ASCII text data/openms-2.5.0+cleaned1/tools/rest_server_update_helper.sh: Bourne-Again shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/spellcheck/lspell2.pl: Perl script text executable data/openms-2.5.0+cleaned1/tools/spellcheck/README: ASCII text data/openms-2.5.0+cleaned1/tools/spellcheck/correct_words.txt: UTF-8 Unicode text data/openms-2.5.0+cleaned1/tools/spellcheck/lspell.pl: Perl script text executable data/openms-2.5.0+cleaned1/tools/checker.php: PHP script, ASCII text data/openms-2.5.0+cleaned1/tools/valgrind/openms_external.supp: ASCII text data/openms-2.5.0+cleaned1/tools/valgrind/openms_internal.supp: ASCII text data/openms-2.5.0+cleaned1/tools/quickbuild.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/tools/common_functions.php: PHP script, ASCII text data/openms-2.5.0+cleaned1/CHANGELOG: ASCII text data/openms-2.5.0+cleaned1/CONTRIBUTING.md: ASCII text data/openms-2.5.0+cleaned1/CTestConfig.cmake: ASCII text data/openms-2.5.0+cleaned1/LICENSE: ASCII text data/openms-2.5.0+cleaned1/.gitignore: ASCII text data/openms-2.5.0+cleaned1/debian/TOPPAS.desktop: UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/TOPPView.desktop: UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/binaries-extract-one-line-man-desc.sh: POSIX shell script, UTF-8 Unicode text executable data/openms-2.5.0+cleaned1/debian/changelog: UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/control: UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/copyright: UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/libopenms-dev.install: ASCII text data/openms-2.5.0+cleaned1/debian/libopenms-dev.links: a /usr/bin/dh-exec script, ASCII text executable data/openms-2.5.0+cleaned1/debian/libopenms.3: troff or preprocessor input, UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/libopenms2.5.0.install: a /usr/bin/dh-exec script, ASCII text executable data/openms-2.5.0+cleaned1/debian/libopenms2.5.0.links: a /usr/bin/dh-exec script, ASCII text executable data/openms-2.5.0+cleaned1/debian/libopenms2.5.0.lintian-overrides: ASCII text data/openms-2.5.0+cleaned1/debian/libopenms2.5.0.manpages: ASCII text data/openms-2.5.0+cleaned1/debian/make-included-headers-hierarchy.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/debian/openms-common.7: troff or preprocessor input, UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/openms-common.install: ASCII text data/openms-2.5.0+cleaned1/debian/openms-common.manpages: ASCII text data/openms-2.5.0+cleaned1/debian/openms-doc.7: troff or preprocessor input, UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/openms-doc.doc-base.libopenms-tutorial: ASCII text data/openms-2.5.0+cleaned1/debian/openms-doc.doc-base.topp-tutorial: ASCII text data/openms-2.5.0+cleaned1/debian/openms-doc.install: ASCII text data/openms-2.5.0+cleaned1/debian/openms-doc.manpages: ASCII text data/openms-2.5.0+cleaned1/debian/openms.7: troff or preprocessor input, UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/openms.docs: ASCII text data/openms-2.5.0+cleaned1/debian/openms.manpages: ASCII text data/openms-2.5.0+cleaned1/debian/patches/installDirsSettingsCmakeBuildSystem.patch: unified diff output, ASCII text data/openms-2.5.0+cleaned1/debian/patches/series: ASCII text data/openms-2.5.0+cleaned1/debian/patches/sonameAndNameLinkSkipCmakeBuildSystem.patch: unified diff output, ASCII text data/openms-2.5.0+cleaned1/debian/purify-openms-svn-source-tree.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/debian/purify-source-tree.sh: POSIX shell script, ASCII text executable data/openms-2.5.0+cleaned1/debian/rules: a /usr/bin/make -f script, ASCII text executable data/openms-2.5.0+cleaned1/debian/source/format: ASCII text data/openms-2.5.0+cleaned1/debian/topp.1-bottom-skel: troff or preprocessor input, UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/topp.1-top-skel: troff or preprocessor input, UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/topp.install: ASCII text data/openms-2.5.0+cleaned1/debian/topp.links: ASCII text data/openms-2.5.0+cleaned1/debian/topp.lintian-overrides: ASCII text data/openms-2.5.0+cleaned1/debian/topp.manpages: ASCII text data/openms-2.5.0+cleaned1/debian/upstream/metadata: UTF-8 Unicode text data/openms-2.5.0+cleaned1/debian/watch: ASCII text data/openms-2.5.0+cleaned1/.pc/.version: ASCII text data/openms-2.5.0+cleaned1/.pc/.quilt_patches: ASCII text data/openms-2.5.0+cleaned1/.pc/.quilt_series: ASCII text data/openms-2.5.0+cleaned1/.pc/applied-patches: ASCII text data/openms-2.5.0+cleaned1/.pc/sonameAndNameLinkSkipCmakeBuildSystem.patch/cmake/add_library_macros.cmake: ASCII text data/openms-2.5.0+cleaned1/.pc/installDirsSettingsCmakeBuildSystem.patch/CMakeLists.txt: ASCII text data/openms-2.5.0+cleaned1/CMakeLists.txt: ASCII text