data/aevol-5.0+ds/ChangeLog: very short file (no magic) data/aevol-5.0+ds/COPYING: ASCII text data/aevol-5.0+ds/doc/aevol_create.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_extract.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol.conf: ASCII text, with very long lines data/aevol-5.0+ds/doc/Makefile.am: makefile script, ASCII text data/aevol-5.0+ds/doc/aevol_misc_gene_families.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_run.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_lineage.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_ancestor_stats.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_create_eps.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_view.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_robustness.1: troff or preprocessor input, ASCII text, with very long lines data/aevol-5.0+ds/doc/aevol_modify.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/aevol_misc_compute_pop_stats.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/doc/README.txt: ASCII text data/aevol-5.0+ds/doc/aevol_propagate.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/configure.ac: ASCII text data/aevol-5.0+ds/NEWS: ASCII text data/aevol-5.0+ds/Makefile.am: automake makefile script, ASCII text data/aevol-5.0+ds/AUTHORS: UTF-8 Unicode text data/aevol-5.0+ds/README: ASCII text data/aevol-5.0+ds/m4/ax_cxx_compile_stdcxx_14.m4: C++ source, ASCII text data/aevol-5.0+ds/m4/ax_cxx_compile_stdcxx_11.m4: C++ source, ASCII text data/aevol-5.0+ds/src/aevol_propagate.cpp: C source, ASCII text data/aevol-5.0+ds/src/aevol_create.cpp: C source, ASCII text data/aevol-5.0+ds/src/libaevol/Individual_X11.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/InsertionHT.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ParamLoader.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/Individual.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/IndividualFactory.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/StatRecord.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/SmallInsertion.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Dna.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/X11Window.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ExpManager.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/PhenotypicTarget_R.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Individual_R_X11.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Habitat_R.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Habitat_R.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/PhenotypicTargetHandler_R.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Protein_R.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Individual_R_X11.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/raevol/Rna_R.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/PhenotypicTargetHandler_R.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/raevol/Individual_R.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/raevol/PhenotypicTarget_R.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Protein_R.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/raevol/Individual_R.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/raevol/Rna_R.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/FuzzyFactory.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/JumpingMT.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/AbstractFuzzy.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Fuzzy.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/SmallDeletion.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-common.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params86243.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/Makefile.am: ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params2281.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params607.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params11213.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params1279.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params44497.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/jump/SFMT-jump.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/jump/SFMT-jump.cpp: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params4253.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params19937.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params216091.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT-params132049.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/SFMT-src-1.4/SFMT.c: C source, ASCII text data/aevol-5.0+ds/src/libaevol/Protein.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/SmallInsertion.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/PhenotypicTargetHandler.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Stats.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/JumpingMT.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/IndividualFactory.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ae_logger.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ParameterLine.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/MutationParams.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Alignment.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ReplicationReport.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Logging.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/SmallDeletion.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Duplication.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/DnaReplicationReport.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Observable.cpp: C source, ASCII text data/aevol-5.0+ds/src/libaevol/PointMutation.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/GridCell.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/AbstractFuzzy.cpp: C source, ASCII text data/aevol-5.0+ds/src/libaevol/GeneticUnit.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ae_string.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Fuzzy.h: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/Duplication.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/NonCodingMetrics.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Makefile.am: automake makefile script, ASCII text data/aevol-5.0+ds/src/libaevol/MutationParams.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Codon.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/GridCell.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Logging.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Deletion.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ExpManager_X11.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/X11Window.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Protein.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/HabitatFactory.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Individual_X11.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Stats.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Translocation.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Gaussian.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/GzHelpers.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Utils.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Habitat.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Codon.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Inversion.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ExpManager.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Observer.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/OutputManager.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ParameterLine.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/World.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ReplicationReport.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Observable.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/make_unique.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ReplacementHT.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Phenotype.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ae_enums.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/macros.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/Inversion.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/aevol.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/VisAVis.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/PointMutation.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Habitat.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/DnaReplicationReport.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Selection.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/AeTime.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ExpSetup.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/World.cpp: C++ source, UTF-8 Unicode text data/aevol-5.0+ds/src/libaevol/Dump.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Dna.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/JumpPoly.h: C++ source, ASCII text, with very long lines data/aevol-5.0+ds/src/libaevol/AeTime.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/PhenotypicTarget.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Deletion.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Rna.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/StatRecord.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Tree.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Rearrangement.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Dump.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/PhenotypicSegment.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Metrics.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/HabitatFactory.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Mutation.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/HybridFuzzy.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/OutputManager.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Alignment.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ExpSetup.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ReplacementHT.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Selection.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/GeneticUnit.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ae_string.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ParamLoader.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Utils.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/LocalMutation.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/HorizontalTransfer.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ExpManager_X11.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/InsertionHT.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/VisAVis.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/PhenotypicTargetHandler.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Individual.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Mutation.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Tree.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Translocation.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Rna.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/FuzzyFactory.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/Point.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/HybridFuzzy.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/PhenotypicTarget.h: C++ source, ASCII text data/aevol-5.0+ds/src/libaevol/ObservableEvent.h: C source, ASCII text data/aevol-5.0+ds/src/libaevol/Point.h: C++ source, ASCII text data/aevol-5.0+ds/src/Makefile.am: automake makefile script, ASCII text data/aevol-5.0+ds/src/aevol_run.cpp: C source, ASCII text data/aevol-5.0+ds/src/aevol_modify.cpp: C source, ASCII text, with very long lines data/aevol-5.0+ds/src/post_treatments/ancestor_stats.cpp: C source, ASCII text data/aevol-5.0+ds/src/post_treatments/lineage.cpp: C source, ASCII text data/aevol-5.0+ds/src/post_treatments/mutagenesis.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/post_treatments/ancestor_robustness.cpp: C source, ASCII text data/aevol-5.0+ds/src/post_treatments/Makefile.am: ASCII text data/aevol-5.0+ds/src/post_treatments/robustness.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/post_treatments/IndivAnalysis.cpp: C++ source, ASCII text data/aevol-5.0+ds/src/post_treatments/extract.cpp: C source, ASCII text data/aevol-5.0+ds/src/post_treatments/view.cpp: C source, ASCII text data/aevol-5.0+ds/src/post_treatments/IndivAnalysis.h: C++ source, ASCII text data/aevol-5.0+ds/src/post_treatments/create_eps.cpp: C source, ASCII text data/aevol-5.0+ds/examples/workflow/wild_type/param.in: ASCII text data/aevol-5.0+ds/examples/workflow/README: ASCII text data/aevol-5.0+ds/examples/basic/param.in: ASCII text data/aevol-5.0+ds/debian/aevol.manpages: ASCII text data/aevol-5.0+ds/debian/aevol_create.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_ancstats.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_compute_pop_stats.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_create_eps.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_extract.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_fixed_mutations.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_gene_families.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_lineage.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_misc_robustness.1: troff or preprocessor input, ASCII text, with very long lines data/aevol-5.0+ds/debian/aevol_misc_view_generation.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_modify.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/aevol_propagate.1: troff or preprocessor input, ASCII text, with very long lines data/aevol-5.0+ds/debian/aevol_run.1: troff or preprocessor input, ASCII text data/aevol-5.0+ds/debian/changelog: UTF-8 Unicode text data/aevol-5.0+ds/debian/control: ASCII text data/aevol-5.0+ds/debian/copyright: UTF-8 Unicode text data/aevol-5.0+ds/debian/docs: ASCII text data/aevol-5.0+ds/debian/examples: ASCII text data/aevol-5.0+ds/debian/rules: a /usr/bin/make -f script, ASCII text executable data/aevol-5.0+ds/debian/source/format: ASCII text data/aevol-5.0+ds/debian/tests/control: ASCII text data/aevol-5.0+ds/debian/tests/run-unit-tests: Bourne-Again shell script, ASCII text executable data/aevol-5.0+ds/debian/upstream/metadata: ASCII text data/aevol-5.0+ds/debian/watch: ASCII text data/aevol-5.0+ds/.pc/.version: ASCII text data/aevol-5.0+ds/.pc/.quilt_patches: ASCII text data/aevol-5.0+ds/.pc/.quilt_series: ASCII text data/aevol-5.0+ds/.pc/applied-patches: empty