data/mira-4.9.6/config.guess:312: Ake ==> Ache data/mira-4.9.6/config.guess:1076: configury ==> configurable data/mira-4.9.6/config.sub:817: msdos ==> ms-dos data/mira-4.9.6/aclocal.m4:623: incase ==> in case data/mira-4.9.6/aclocal.m4:660: permision ==> permission data/mira-4.9.6/configure:1456: dependend ==> dependent, depended data/mira-4.9.6/configure:5363: plattforms ==> platforms data/mira-4.9.6/configure:17671: Choosen ==> Chosen data/mira-4.9.6/ltmain.sh:3: gord ==> gourd data/mira-4.9.6/ltmain.sh:192: retuned ==> returned data/mira-4.9.6/ltmain.sh:525: incase ==> in case data/mira-4.9.6/ltmain.sh:1016: clea ==> clean data/mira-4.9.6/ltmain.sh:1022: execut ==> execute data/mira-4.9.6/ltmain.sh:1028: instal ==> install data/mira-4.9.6/ltmain.sh:4397: inluding ==> including data/mira-4.9.6/ltmain.sh:4573: MSDOS ==> MS-DOS data/mira-4.9.6/configure.ac:191: dependend ==> dependent, depended data/mira-4.9.6/configure.ac:435: plattforms ==> platforms data/mira-4.9.6/configure.ac:788: Choosen ==> Chosen data/mira-4.9.6/depcomp:318: Maked ==> Marked, made data/mira-4.9.6/depcomp:328: Maked ==> Marked, made data/mira-4.9.6/depcomp:332: Maked ==> Marked, made data/mira-4.9.6/m4/ax_boost_base.m4:13: searchs ==> searches data/mira-4.9.6/m4/ax_boost_base.m4:113: ist ==> is, it, its, it's, sit, list data/mira-4.9.6/doc/docbook/chap_seqadvice_part.xml:248: algorithmical ==> algorithmically data/mira-4.9.6/doc/docbook/chap_maf_part.xml:24: superceeded ==> superseded data/mira-4.9.6/doc/docbook/chap_installation_part.xml:150: diretory ==> directory data/mira-4.9.6/doc/docbook/chap_installation_part.xml:593: definetly ==> definitely data/mira-4.9.6/doc/docbook/chap_installation_part.xml:848: paramaters ==> parameters data/mira-4.9.6/doc/docbook/chap_bonus_part.xml:167: ende ==> end data/mira-4.9.6/doc/docbook/chap_logfiles_part.xml:79: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:982: orginal ==> original data/mira-4.9.6/doc/docbook/chap_reference_part.xml:1643: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:1713: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:1750: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:1763: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:1876: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:1931: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2023: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2048: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2113: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2132: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2161: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2189: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2230: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2305: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2345: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2345: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2366: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2379: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2393: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2409: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2486: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2543: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2553: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2563: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2593: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2633: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2688: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2703: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2718: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2738: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2749: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2819: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2827: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2846: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2882: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2918: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2933: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2953: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:2995: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3022: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3088: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3118: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3146: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3175: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3193: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3299: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3339: overriden ==> overridden data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3414: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3470: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3631: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3716: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:3962: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4098: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4113: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4131: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4256: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4274: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4291: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4303: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4316: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4353: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4469: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4481: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4502: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4525: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4548: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4586: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4929: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4945: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4970: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4982: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:4997: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5008: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5018: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5036: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5047: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5061: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5071: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5081: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5091: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5101: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5111: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5121: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5131: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5141: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5151: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5161: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5171: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5181: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5191: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5201: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5211: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:5221: alse ==> also, else, false data/mira-4.9.6/doc/docbook/chap_reference_part.xml:6353: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/doc/docbook/chap_seqtechdesc_part.xml:839: accurracy ==> accuracy data/mira-4.9.6/doc/docbook/chap_est_part.xml:573: fragements ==> fragments data/mira-4.9.6/doc/docbook/chap_sra_part.xml:101: whereever ==> wherever data/mira-4.9.6/doc/docbook/attic/pb_misc.xml:10: alignmen ==> alignment data/mira-4.9.6/distribution/README:89: wher ==> where data/mira-4.9.6/src/progs/Makefile.in:237: infor ==> info data/mira-4.9.6/src/progs/Makefile.am:41: infor ==> info data/mira-4.9.6/src/progs/mira.C:226: programm ==> program, programme data/mira-4.9.6/src/progs/mira.C:243: nWe ==> new data/mira-4.9.6/src/modules/mod_memestim.C:128: defint ==> definite, define data/mira-4.9.6/src/modules/mod_memestim.C:131: defint ==> definite, define data/mira-4.9.6/src/modules/mod_memestim.C:391: whe ==> when, we data/mira-4.9.6/src/modules/mod_convert.C:275: tThe ==> the data/mira-4.9.6/src/modules/mod_convert.C:605: dependend ==> dependent, depended data/mira-4.9.6/src/modules/mod_bait.C:142: exeption ==> exception, exemption data/mira-4.9.6/src/modules/mod_bait.C:142: exeption ==> exception, exemption data/mira-4.9.6/src/modules/mod_bait.C:308: ouput ==> output data/mira-4.9.6/src/util/dptools.C:220: esy ==> easy data/mira-4.9.6/src/util/dptools.C:402: realy ==> really data/mira-4.9.6/src/util/dptools.H:110: othe ==> other data/mira-4.9.6/src/util/memusage.H:154: objetc ==> object data/mira-4.9.6/src/util/memusage.H:195: objetc ==> object data/mira-4.9.6/src/util/fileanddisk.C:761: fo ==> of, for data/mira-4.9.6/src/util/fileanddisk.C:761: fo ==> of, for data/mira-4.9.6/src/util/fileanddisk.C:761: fo ==> of, for data/mira-4.9.6/src/memorc/memorc.H:72: contructor ==> constructor data/mira-4.9.6/src/memorc/memorc.C:60: adress ==> address data/mira-4.9.6/src/memorc/memorc.C:77: adress ==> address data/mira-4.9.6/src/memorc/memorc.C:158: reqested ==> requested data/mira-4.9.6/src/io/gap4_ft_so_map.xxd:43: FiDN ==> find data/mira-4.9.6/src/io/so.obo:163: BRE ==> BE, BRIE data/mira-4.9.6/src/io/so.obo:5983: adjcent ==> adjacent data/mira-4.9.6/src/io/so.obo:6497: respose ==> response data/mira-4.9.6/src/io/so.obo:6679: TE ==> THE, BE, WE data/mira-4.9.6/src/io/so.obo:6679: TE ==> THE, BE, WE data/mira-4.9.6/src/io/so.obo:6690: TE ==> THE, BE, WE data/mira-4.9.6/src/io/so.obo:6700: TE ==> THE, BE, WE data/mira-4.9.6/src/io/so.obo:7302: diferent ==> different data/mira-4.9.6/src/io/so.obo:9342: oposite ==> opposite data/mira-4.9.6/src/io/so.obo:9352: oposite ==> opposite data/mira-4.9.6/src/io/so.obo:10054: BRE ==> BE, BRIE data/mira-4.9.6/src/io/so.obo:10565: sructure ==> structure data/mira-4.9.6/src/io/so.obo:10708: continous ==> continuous data/mira-4.9.6/src/io/so.obo:12367: Ser ==> Set data/mira-4.9.6/src/io/so.obo:14929: abstrac ==> abstract data/mira-4.9.6/src/io/so.obo:16389: defintition ==> definition data/mira-4.9.6/src/io/generalio.C:74: ket ==> kept data/mira-4.9.6/src/io/exp_flexer.ll:26: ANID ==> AND data/mira-4.9.6/src/io/exp_flexer.ll:46: ANID ==> AND data/mira-4.9.6/src/io/exp_flexer.ll:124: ANID ==> AND data/mira-4.9.6/src/io/scf.C:862: ther ==> there, their, the, other data/mira-4.9.6/src/io/scf.C:898: ther ==> there, their, the, other data/mira-4.9.6/src/io/scf.C:1369: oder ==> order, odor data/mira-4.9.6/src/io/scf.C:1369: oder ==> order, odor data/mira-4.9.6/src/io/scf.C:1369: oder ==> order, odor data/mira-4.9.6/src/io/scf.C:1369: oder ==> order, odor data/mira-4.9.6/src/io/scf.C:1370: oder ==> order, odor data/mira-4.9.6/src/io/scf.C:1370: oder ==> order, odor data/mira-4.9.6/src/io/scf.C:1371: oder ==> order, odor data/mira-4.9.6/src/io/exp.C:28: fro ==> for, from data/mira-4.9.6/src/mira/skim.H:388: eventuall ==> eventually data/mira-4.9.6/src/mira/skim.H:441: whould ==> would data/mira-4.9.6/src/mira/assembly_pbcorrect.C:155: carefull ==> careful, carefully data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1074: leas ==> least, lease data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1816: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1817: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1818: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1819: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1820: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1821: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1822: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1823: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1825: te ==> the, be, we data/mira-4.9.6/src/mira/assembly_pbcorrect.C:1877: proces ==> process data/mira-4.9.6/src/mira/assembly_misc.C:2234: definetely ==> definitely data/mira-4.9.6/src/mira/dynamic.H:106: calulated ==> calculated data/mira-4.9.6/src/mira/assembly.H:308: wich ==> which data/mira-4.9.6/src/mira/assembly.H:319: bulding ==> building data/mira-4.9.6/src/mira/assembly.C:659: ist ==> is, it, its, it's, sit, list data/mira-4.9.6/src/mira/assembly.C:1190: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/assembly.C:1790: embarassing ==> embarrassing data/mira-4.9.6/src/mira/assembly.C:1793: embarassing ==> embarrassing data/mira-4.9.6/src/mira/assembly.C:1799: embarassing ==> embarrassing data/mira-4.9.6/src/mira/assembly.C:1802: embarassing ==> embarrassing data/mira-4.9.6/src/mira/assembly.C:2305: Transfering ==> Transferring data/mira-4.9.6/src/mira/assembly.C:2360: carefull ==> careful, carefully data/mira-4.9.6/src/mira/assembly.C:2394: Transfering ==> Transferring data/mira-4.9.6/src/mira/assembly.C:2559: Transfering ==> Transferring data/mira-4.9.6/src/mira/assembly.C:2562: Transfering ==> Transferring data/mira-4.9.6/src/mira/assembly.C:2594: transfering ==> transferring data/mira-4.9.6/src/mira/assembly.C:2756: initialiase ==> initialise, initialize data/mira-4.9.6/src/mira/ads.H:61: alignement ==> alignment data/mira-4.9.6/src/mira/hashstats_sdbg.C:122: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:127: hsI ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:127: hsI ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:127: hsI ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:127: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:128: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:129: hsI ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:129: hsI ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:130: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:131: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:134: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:236: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:236: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:236: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:237: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:239: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:241: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:244: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:247: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:248: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:249: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:250: hsi ==> his data/mira-4.9.6/src/mira/hashstats_sdbg.C:317: hsi ==> his data/mira-4.9.6/src/mira/vluint.H:314: CONVERTORS ==> CONVERTERS data/mira-4.9.6/src/mira/dataprocessing.C:570: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:571: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:572: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:580: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:581: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:585: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:586: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:591: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:614: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:615: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:616: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:617: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:618: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:622: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:629: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:630: te ==> the, be, we data/mira-4.9.6/src/mira/dataprocessing.C:1490: trun ==> turn data/mira-4.9.6/src/mira/dataprocessing.C:1502: trun ==> turn data/mira-4.9.6/src/mira/dataprocessing.C:1504: trun ==> turn data/mira-4.9.6/src/mira/dataprocessing.C:1505: trun ==> turn data/mira-4.9.6/src/mira/dataprocessing.C:1505: trun ==> turn data/mira-4.9.6/src/mira/dataprocessing.C:1512: trun ==> turn data/mira-4.9.6/src/mira/dataprocessing.C:2147: acount ==> account data/mira-4.9.6/src/mira/dataprocessing.C:2153: acount ==> account data/mira-4.9.6/src/mira/dataprocessing.C:2159: acount ==> account data/mira-4.9.6/src/mira/ppathfinder.H:330: initiliased ==> initialised, initialized data/mira-4.9.6/src/mira/parameters.C:1589: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:1816: fo ==> of, for data/mira-4.9.6/src/mira/parameters.C:2274: te ==> the, be, we data/mira-4.9.6/src/mira/parameters.C:2275: te ==> the, be, we data/mira-4.9.6/src/mira/parameters.C:2699: te ==> the, be, we data/mira-4.9.6/src/mira/parameters.C:2700: te ==> the, be, we data/mira-4.9.6/src/mira/parameters.C:3983: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4508: fo ==> of, for data/mira-4.9.6/src/mira/parameters.C:4541: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4561: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4589: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4617: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4648: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4677: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4709: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4758: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4773: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4787: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4800: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:4848: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:5053: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:5102: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:5112: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/parameters.C:5419: ure ==> sure, ire, are, urea, rue data/mira-4.9.6/src/mira/contig_featureinfo.C:230: carefull ==> careful, carefully data/mira-4.9.6/src/mira/contig_featureinfo.C:403: inbetween ==> between, in between data/mira-4.9.6/src/mira/contig.H:635: commment ==> comment data/mira-4.9.6/src/mira/contig.H:1095: fille ==> file, fill, filled data/mira-4.9.6/src/mira/skim_lowbph.C:314: hve ==> have data/mira-4.9.6/src/mira/skim_lowbph.C:315: hve ==> have data/mira-4.9.6/src/mira/skim_lowbph.C:316: hve ==> have data/mira-4.9.6/src/mira/CHANGES.txt:52: accomodate ==> accommodate data/mira-4.9.6/src/mira/CHANGES.txt:86: inadvertantly ==> inadvertently data/mira-4.9.6/src/mira/CHANGES.txt:116: implemention ==> implementation data/mira-4.9.6/src/mira/CHANGES.txt:173: comming ==> coming data/mira-4.9.6/src/mira/CHANGES.txt:203: apllies ==> applies data/mira-4.9.6/src/mira/CHANGES.txt:440: explicitely ==> explicitly data/mira-4.9.6/src/mira/CHANGES.txt:460: eachother ==> each other data/mira-4.9.6/src/mira/CHANGES.txt:463: evalute ==> evaluate data/mira-4.9.6/src/mira/CHANGES.txt:493: convertable ==> convertible data/mira-4.9.6/src/mira/CHANGES.txt:522: splitted ==> split data/mira-4.9.6/src/mira/CHANGES.txt:525: corrrect ==> correct data/mira-4.9.6/src/mira/CHANGES.txt:717: propper ==> proper data/mira-4.9.6/src/mira/manifest.C:387: te ==> the, be, we data/mira-4.9.6/src/mira/manifest.C:388: te ==> the, be, we data/mira-4.9.6/src/mira/structs.H:410: ovelap ==> overlap data/mira-4.9.6/src/mira/adsfacts.C:29: alignement ==> alignment data/mira-4.9.6/src/mira/gff_parse.C:253: fle ==> file data/mira-4.9.6/src/mira/read.H:82: seqence ==> sequence data/mira-4.9.6/src/mira/read.H:788: swaped ==> swapped data/mira-4.9.6/src/mira/hashstats.C:53: splitted ==> split data/mira-4.9.6/src/mira/hashstats.C:146: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:148: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:150: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:150: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:150: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:151: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:153: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:153: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:158: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:167: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:169: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:171: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:171: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:171: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:172: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:174: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:174: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:179: hsa ==> has data/mira-4.9.6/src/mira/hashstats.C:389: desctructor ==> destructor data/mira-4.9.6/src/mira/hashstats.C:2057: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2058: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2062: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2086: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2095: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2100: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2102: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2110: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2120: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2130: wont ==> won't data/mira-4.9.6/src/mira/hashstats.C:2135: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2147: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2201: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2202: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2206: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2207: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2208: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2209: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2209: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2212: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2213: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2215: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2994: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:2996: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3002: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3002: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3007: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3008: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3012: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3013: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3071: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3073: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3080: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3080: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3085: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3086: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3091: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3093: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3136: hsi ==> his data/mira-4.9.6/src/mira/hashstats.C:3137: hsi ==> his data/mira-4.9.6/src/mira/hashstats.C:3187: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3189: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3196: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3196: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3201: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3202: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3207: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3209: hsI ==> his data/mira-4.9.6/src/mira/hashstats.C:3253: WTH ==> WITH data/mira-4.9.6/src/mira/assembly_swalign.C:753: inbetween ==> between, in between data/mira-4.9.6/src/mira/assembly_swalign.C:2075: ist ==> is, it, its, it's, sit, list data/mira-4.9.6/src/mira/read.C:439: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:440: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:441: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:444: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:445: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:834: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:835: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:835: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:836: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:836: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:927: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:928: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:928: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:929: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:929: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1851: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1852: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1853: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1854: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1854: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1854: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1854: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1855: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:1860: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2150: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2151: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2152: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2153: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2153: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2155: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2155: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2160: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2162: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2338: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2339: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2340: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2340: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2340: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2341: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2368: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:2369: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3265: adjustements ==> adjustments data/mira-4.9.6/src/mira/read.C:3844: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3845: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3846: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3850: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3853: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3886: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3887: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3888: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3889: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3890: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:3892: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:5690: begining ==> beginning data/mira-4.9.6/src/mira/read.C:7139: emtpy ==> empty data/mira-4.9.6/src/mira/read.C:7281: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7285: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7286: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7287: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7288: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7289: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7290: te ==> the, be, we data/mira-4.9.6/src/mira/read.C:7292: te ==> the, be, we data/mira-4.9.6/src/mira/readpool_io.C:727: fle ==> file data/mira-4.9.6/src/mira/readpool_io.C:750: fle ==> file data/mira-4.9.6/src/mira/readpool_io.C:1009: leaded ==> led, lead data/mira-4.9.6/src/mira/skim.C:1443: reverese ==> reverse data/mira-4.9.6/src/mira/skim.C:2637: hist ==> heist, his data/mira-4.9.6/src/mira/contig_analysis.C:796: ist ==> is, it, its, it's, sit, list data/mira-4.9.6/src/mira/contig_analysis.C:1020: ist ==> is, it, its, it's, sit, list data/mira-4.9.6/src/mira/contig_analysis.C:1513: dependend ==> dependent, depended data/mira-4.9.6/src/mira/contig_analysis.C:2431: dependend ==> dependent, depended data/mira-4.9.6/src/mira/contig_analysis.C:4504: sourrounding ==> surrounding data/mira-4.9.6/src/mira/pcrcontainer.H:289: prooves ==> proves data/mira-4.9.6/src/mira/multitag.C:79: ofrom ==> from data/mira-4.9.6/src/mira/multitag.C:82: ofrom ==> from data/mira-4.9.6/src/mira/multitag.C:82: ofrom ==> from data/mira-4.9.6/src/mira/multitag.C:84: ofrom ==> from data/mira-4.9.6/src/mira/multitag.C:84: ofrom ==> from data/mira-4.9.6/src/mira/multitag.C:103: ofrom ==> from data/mira-4.9.6/src/mira/contig_output.C:355: aci ==> acpi data/mira-4.9.6/src/mira/contig_output.C:355: aci ==> acpi data/mira-4.9.6/src/mira/contig_output.C:355: aci ==> acpi data/mira-4.9.6/src/mira/contig_output.C:1280: embedd ==> embed data/mira-4.9.6/src/mira/contig_output.C:1280: embedd ==> embed data/mira-4.9.6/src/mira/contig_output.C:1381: preceeding ==> preceding, proceeding data/mira-4.9.6/src/mira/gff_save.C:107: Inconsisteny ==> Inconsistency, inconsistent data/mira-4.9.6/src/mira/align.H:65: transfered ==> transferred data/mira-4.9.6/src/mira/align.H:67: transfered ==> transferred data/mira-4.9.6/src/mira/align.H:70: alowed ==> allowed data/mira-4.9.6/src/mira/readpool.C:320: folowing ==> following data/mira-4.9.6/src/mira/readpool.C:510: delets ==> deletes data/mira-4.9.6/src/mira/readpool.C:641: tre ==> tree data/mira-4.9.6/src/mira/readpool.C:644: tre ==> tree data/mira-4.9.6/src/mira/readpool.C:645: tre ==> tree data/mira-4.9.6/src/mira/readpool.C:647: tre ==> tree data/mira-4.9.6/src/mira/readpool.C:678: tre ==> tree data/mira-4.9.6/src/mira/readpool.C:679: tre ==> tree data/mira-4.9.6/src/mira/readpool.C:680: tre ==> tree data/mira-4.9.6/src/mira/assembly_info.C:306: acI ==> acpi data/mira-4.9.6/src/mira/assembly_info.C:307: acI ==> acpi data/mira-4.9.6/src/mira/assembly_info.C:307: acI ==> acpi data/mira-4.9.6/src/mira/assembly_info.C:307: acI ==> acpi data/mira-4.9.6/src/mira/assembly_info.C:308: acI ==> acpi data/mira-4.9.6/src/mira/ads.C:29: alignement ==> alignment data/mira-4.9.6/src/mira/ads.C:2182: maxiumum ==> maximum data/mira-4.9.6/src/mira/ads.C:2450: rever ==> revert, fever data/mira-4.9.6/src/mira/assembly_io.C:301: worarounds ==> workarounds data/mira-4.9.6/src/mira/assembly_io.C:557: accomodate ==> accommodate data/mira-4.9.6/src/mira/assembly_io.C:1154: minumum ==> minimum data/mira-4.9.6/src/mira/gbf_parse.C:441: writen ==> written data/mira-4.9.6/src/mira/hdeque.H:132: prooves ==> proves data/mira-4.9.6/src/mira/contig_consensus.C:74: calulation ==> calculation data/mira-4.9.6/src/mira/contig_consensus.C:1309: taks ==> task, tasks data/mira-4.9.6/src/mira/contig_consensus.C:1785: wheter ==> whether data/mira-4.9.6/debian/changelog:205: dependance ==> dependence data/mira-4.9.6/debian/mira-assembler.lintian-overrides:1: transfering ==> transferring data/mira-4.9.6/debian/mira-assembler.lintian-overrides:2: Transfering ==> Transferring data/mira-4.9.6/debian/mira-doc.doc-base:2: wirh ==> with data/mira-4.9.6/debian/patches/spelling.patch:4: ressize ==> resize data/mira-4.9.6/debian/patches/spelling.patch:13: Uknown ==> Unknown data/mira-4.9.6/debian/patches/spelling.patch:24: immediatly ==> immediately data/mira-4.9.6/debian/tests/solexa1.conf:17: allso ==> also data/mira-4.9.6/.pc/spelling.patch/src/mira/contig_consensus.C:74: calulation ==> calculation data/mira-4.9.6/.pc/spelling.patch/src/mira/contig_consensus.C:1309: taks ==> task, tasks data/mira-4.9.6/.pc/spelling.patch/src/mira/contig_consensus.C:1785: wheter ==> whether data/mira-4.9.6/.pc/spelling.patch/src/mira/contig_consensus.C:2581: Uknown ==> Unknown data/mira-4.9.6/.pc/spelling.patch/src/progs/mira.C:226: programm ==> program, programme data/mira-4.9.6/.pc/spelling.patch/src/progs/mira.C:243: nWe ==> new data/mira-4.9.6/.pc/spelling.patch/src/progs/mira.C:248: immediatly ==> immediately