data/dindel-1.01-wu1-3+dfsg/Faster.cpp:64: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:71: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:77: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:77: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:618: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:620: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:638: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:641: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:656: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Faster.cpp:658: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Haplotype.hpp:229: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Haplotype.hpp:238: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/Haplotype.hpp:248: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:51: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:59: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:62: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:62: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:74: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:74: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:83: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:83: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:1391: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:1393: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:1418: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:1433: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:1448: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/ObservationModelFB.cpp:1450: hapEnd ==> happened
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:161: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:161: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2415: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2485: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2489: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2493: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2493: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2506: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2506: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2507: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2507: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2508: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2509: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2516: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2516: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2518: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2673: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2682: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2692: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2692: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2693: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2725: truely ==> truly
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2803: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2811: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2811: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:2811: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3161: truely ==> truly
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3302: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3303: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3304: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3366: substract ==> subtract
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3374: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3545: truely ==> truly
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3652: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3653: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3654: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3657: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3657: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3657: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3700: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3736: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3741: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3745: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3747: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:3750: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:4079: libary ==> library
data/dindel-1.01-wu1-3+dfsg/DInDel.cpp:4149: auxilary ==> auxiliary
data/dindel-1.01-wu1-3+dfsg/python/convertVCFToDindel.py:12: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/convertVCFToDindel.py:42: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/convertVCFToDindel.py:45: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeGenotypeLikelihoodFilePooled.py:93: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/python/makeGenotypeLikelihoodFilePooled.py:94: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:52: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:53: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:96: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:98: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:104: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:112: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/makeWindows.py:216: mininum ==> minimum
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputDiploid.py:8: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputDiploid.py:9: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputDiploid.py:14: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputDiploid.py:15: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputPooled.py:8: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputPooled.py:9: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputPooled.py:14: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/mergeOutputPooled.py:15: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/python/selectCandidates.py:6: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/selectCandidates.py:10: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/selectCandidates.py:18: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/selectCandidates.py:53: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/selectCandidates.py:63: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/python/selectCandidates.py:65: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/debian/dindel.1:156: auxilary ==> auxiliary
data/dindel-1.01-wu1-3+dfsg/debian/dindel.1:352: auxilary ==> auxiliary
data/dindel-1.01-wu1-3+dfsg/debian/patches/2to3.patch:166: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/debian/patches/2to3.patch:213: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/debian/patches/2to3.patch:368: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/debian/patches/2to3.patch:373: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:161: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:161: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2415: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2485: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2489: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2493: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2493: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2506: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2506: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2507: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2507: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2508: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2509: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2516: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2516: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2518: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2673: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2682: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2692: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2692: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2693: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2725: truely ==> truly
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2803: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2811: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2811: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:2811: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3161: truely ==> truly
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3302: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3303: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3304: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3366: substract ==> subtract
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3374: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3545: truely ==> truly
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3652: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3653: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3654: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3657: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3657: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3657: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3700: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3736: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3741: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3745: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3747: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:3750: eNew ==> new
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:4079: libary ==> library
data/dindel-1.01-wu1-3+dfsg/.pc/compiler_errors.patch/DInDel.cpp:4149: auxilary ==> auxiliary
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/convertVCFToDindel.py:12: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/convertVCFToDindel.py:42: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/convertVCFToDindel.py:45: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeGenotypeLikelihoodFilePooled.py:93: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeGenotypeLikelihoodFilePooled.py:94: lik ==> like, lick, link
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:52: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:53: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:96: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:98: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:104: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:112: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/makeWindows.py:216: mininum ==> minimum
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputDiploid.py:8: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputDiploid.py:9: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputDiploid.py:14: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputDiploid.py:15: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputPooled.py:8: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputPooled.py:9: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputPooled.py:14: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/mergeOutputPooled.py:15: hist ==> heist, his
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/selectCandidates.py:6: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/selectCandidates.py:10: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/selectCandidates.py:18: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/selectCandidates.py:53: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/selectCandidates.py:63: fo ==> of, for
data/dindel-1.01-wu1-3+dfsg/.pc/2to3.patch/python/selectCandidates.py:65: fo ==> of, for