    data/bioperl-run-1.7.3/Changes:110: ths ==> the, this
    data/bioperl-run-1.7.3/Changes:163: lenght ==> length
    data/bioperl-run-1.7.3/LICENSE:131: MERCHANTIBILITY ==> MERCHANTABILITY
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:21: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:25: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:43: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:243: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:246: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:297: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:300: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/ESoap.pm:394: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:165: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:169: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:169: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:464: parms ==> params, prams
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:497: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:500: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:502: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:566: parms ==> params, prams
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:569: parms ==> params, prams
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:570: parms ==> params, prams
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:614: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities.pm:616: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm:131: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm:131: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm:147: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm:166: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm:172: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/DocSumAdaptor.pm:181: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm:138: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm:138: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm:177: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm:177: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm:202: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/GQueryAdaptor.pm:202: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm:139: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm:140: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm:140: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm:175: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/LinkAdaptor.pm:175: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:34: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:60: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:125: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:133: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:155: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:157: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:243: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:245: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:245: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:279: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:338: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:340: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:342: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:343: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:348: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:432: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:462: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/Result.pm:467: SOM ==> SOME
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm:173: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm:173: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm:267: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm:307: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm:411: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/seq.pm:442: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/species.pm:117: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/DB/SoapEUtilities/FetchAdaptor/species.pm:117: som ==> some
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/BEDTools.pm:610: resonable ==> reasonable
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/BEDTools.pm:838: parms ==> params, prams
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/BEDTools.pm:875: bahaviour ==> behaviour
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/BEDTools.pm:881: dum ==> dumb
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/BEDTools.pm:882: dum ==> dumb
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/EMBOSSacd.pm:61: retrive ==> retrieve
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/EMBOSSacd.pm:261: argment ==> argument
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Ensembl.pm:117: registy ==> registry
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Eponine.pm:402: wierd ==> weird
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/FootPrinter.pm:101: tre ==> tree
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Hmmer.pm:59: specifiy ==> specify
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Primate.pm:137: objet ==> object
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Primer3.pm:619: aligment ==> alignment
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Primer3.pm:620: aligment ==> alignment
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/RNAMotif.pm:80: worng ==> wrong, worn
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Simprot.pm:409: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/StandAloneBlast.pm:118: readibility ==> readability
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/StandAloneBlastPlus.pm:229: constuction ==> construction
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/StandAloneBlastPlus.pm:521: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/StandAloneBlastPlus.pm:741: accomodate ==> accommodate
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/StandAloneBlastPlus.pm:1119: exeception ==> exception
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/StandAloneNCBIBlast.pm:511: nin ==> inn, min, bin, nine
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/TribeMCL.pm:45: rigourous ==> rigorous
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/TribeMCL.pm:191: executabes ==> executables
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/TribeMCL.pm:440: Algorith ==> Algorithm
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/TribeMCL.pm:588: formated ==> formatted
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Vista.pm:218: Construtor ==> Constructor
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/DBA.pm:432: containg ==> containing
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Exonerate.pm:45: arugment ==> argument
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Exonerate.pm:51: exonorate ==> exonerate
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/MSAProbs.pm:324: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Muscle.pm:198: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Probalign.pm:217: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Probcons.pm:246: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Proda.pm:217: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Sim4.pm:164: facilitiate ==> facilitate
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/StandAloneFasta.pm:252: aray ==> array
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Alignment/Kalign.pm:227: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Analysis/soap.pm:392: fo ==> of, for
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/BlastPlus/Config.pm:28: parms ==> params, prams
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/FastTree.pm:27: aligment ==> alignment
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/FastTree.pm:153: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/FastTree.pm:252: incase ==> in case
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phyml.pm:105: convienience ==> convenience
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phyml.pm:196: BION ==> BIO
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phyml.pm:616: postive ==> positive
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phyml.pm:733: frequences ==> frequencies
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phyml.pm:861: explicitely ==> explicitly
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/QuickTree.pm:280: incase ==> in case
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Raxml.pm:27: aligment ==> alignment
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Raxml.pm:161: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Raxml.pm:282: incase ==> in case
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/SLR.pm:179: subsitution ==> substitution
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/SLR.pm:182: subsitution ==> substitution
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/SLR.pm:186: Larget ==> Larger, largest, target
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/SLR.pm:221: subsitution ==> substitution
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/SLR.pm:597: couldnt ==> couldn't
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/SLR.pm:637: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Hyphy/Base.pm:351: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Molphy/ProtML.pm:56: tre ==> tree
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Molphy/ProtML.pm:99: boostrap ==> bootstrap
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Molphy/ProtML.pm:102: OTU ==> OUT
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Molphy/ProtML.pm:201: boostrap ==> bootstrap
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Molphy/ProtML.pm:204: OTU ==> OUT
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Njtree/Best.pm:340: analysus ==> analysis
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phast/PhyloFit.pm:40: flexability ==> flexibility
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/Consense.pm:33: aligments ==> alignments
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/Consense.pm:65: nd ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/Neighbor.pm:68: orgininal ==> original
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/Neighbor.pm:68: OTU ==> OUT
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/Neighbor.pm:71: nd ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/Neighbor.pm:76: PARAMTERS ==> PARAMETERS
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:140: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:141: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:141: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:180: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:289: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:290: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/PhylipConf.pm:290: nD ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:56: orgininal ==> original
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:56: OTU ==> OUT
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:59: nd ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:109: aligments ==> alignments
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:143: Ser ==> Set
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:145: Ser ==> Set
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtDist.pm:148: Ser ==> Set
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm:46: orgininal ==> original
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm:46: OTU ==> OUT
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm:49: nd ==> and, 2nd
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm:53: PARAMTERS ==> PARAMETERS
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/ProtPars.pm:64: documetation ==> documentation
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm:24: bootstap ==> bootstrap
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm:38: orginal ==> original
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm:41: orgininal ==> original
    data/bioperl-run-1.7.3/lib/Bio/Tools/Run/Phylo/Phylip/SeqBoot.pm:56: boostrapping ==> bootstrapping
    data/bioperl-run-1.7.3/scripts/bp_blast2tree.pl:111: tre ==> tree
    data/bioperl-run-1.7.3/scripts/papplmaker.PLS:159: nams ==> names
    data/bioperl-run-1.7.3/t/Amap.t:24: thats ==> that's
    data/bioperl-run-1.7.3/t/Amap.t:53: Wont ==> Won't
    data/bioperl-run-1.7.3/t/Amap.t:54: Cant ==> Can't
    data/bioperl-run-1.7.3/t/Amap.t:54: exectuable ==> executable
    data/bioperl-run-1.7.3/t/Amap.t:64: isnt ==> isn't
    data/bioperl-run-1.7.3/t/Amap.t:72: isnt ==> isn't
    data/bioperl-run-1.7.3/t/Gerp.t:45: alingment ==> alignment
    data/bioperl-run-1.7.3/t/Neighbor.t:106: nd ==> and, 2nd
    data/bioperl-run-1.7.3/t/SoapEU-function.t:89: parms ==> params, prams
    data/bioperl-run-1.7.3/t/SoapEU-function.t:113: parms ==> params, prams
    data/bioperl-run-1.7.3/t/gmap-run.t:34: tE ==> the, be, we
    data/bioperl-run-1.7.3/t/ProtPars.t:83: nd ==> and, 2nd
    data/bioperl-run-1.7.3/t/SABlastPlus.t:284: explict ==> explicit
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:28: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:31: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:32: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:46: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:47: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:49: parms ==> params, prams
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:58: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:61: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WBCommandExts.t:62: parm ==> param, pram, parma
    data/bioperl-run-1.7.3/t/Tools/Run/WrapperBase.t:31: existance ==> existence
    data/bioperl-run-1.7.3/t/data/TribeMCL.bls:338: ND ==> AND, 2ND
    data/bioperl-run-1.7.3/t/data/TribeMCL.bls:4204: LKE ==> LIKE
    data/bioperl-run-1.7.3/t/data/TribeMCL.desc:61: Ressurection ==> Resurrection
    data/bioperl-run-1.7.3/t/data/cysprot.msf:28: TE ==> THE, BE, WE
    data/bioperl-run-1.7.3/t/data/efetch_seq.wsdl:79: Intials ==> Initials
    data/bioperl-run-1.7.3/t/data/efetch_seq.wsdl:489: representated ==> represented
    data/bioperl-run-1.7.3/t/data/efetch_seq.wsdl:633: occuring ==> occurring
    data/bioperl-run-1.7.3/t/data/gb_result.xml:62: Skelton ==> Skeleton
    data/bioperl-run-1.7.3/t/data/gb_result.xml:311: superceded ==> superseded
    data/bioperl-run-1.7.3/t/data/pfam_sample_R11:6: ALPH ==> ALPHA
    data/bioperl-run-1.7.3/t/data/test-spa-p.fas:294: ATLL ==> ALL
    data/bioperl-run-1.7.3/t/data/test-spa-p.fas:993: ATLL ==> ALL
    data/bioperl-run-1.7.3/t/data/transfac.dat:32: BA ==> BY, BE
    data/bioperl-run-1.7.3/t/data/transfac.dat:68: BA ==> BY, BE
    data/bioperl-run-1.7.3/t/data/transfac.dat:69: BA ==> BY, BE
    data/bioperl-run-1.7.3/t/data/tree_of_life:262: LATES ==> LATER, LATEST
    data/bioperl-run-1.7.3/debian/README.Debian:27: patten ==> pattern, patent
    data/bioperl-run-1.7.3/debian/README.test:1: ressources ==> resources
    data/bioperl-run-1.7.3/debian/changelog:10: pary ==> party, parry
    data/bioperl-run-1.7.3/debian/changelog:210: versionned ==> versioned
    data/bioperl-run-1.7.3/debian/changelog:210: build-dependancy ==> build-dependency
    data/bioperl-run-1.7.3/debian/changelog:211: build-dependancy ==> build-dependency
    data/bioperl-run-1.7.3/debian/changelog:214: DEPENDANCIES ==> DEPENDENCIES
    data/bioperl-run-1.7.3/debian/rules:16: fpr ==> for, far, fps
    data/bioperl-run-1.7.3/debian/patches/skip_tests_for_phylip.patch:12: nd ==> and, 2nd
    data/bioperl-run-1.7.3/debian/patches/skip_tests_for_phylip.patch:17: nd ==> and, 2nd
    data/bioperl-run-1.7.3/debian/patches/skip_tests_for_phyml.patch:11: whould ==> would
    data/bioperl-run-1.7.3/debian/patches/skip_tests_for_soap.patch:38: existant ==> existent
    data/bioperl-run-1.7.3/debian/test_hack_bin/DBA:2: fullfill ==> fulfill, fulfil
    data/bioperl-run-1.7.3/debian/test_hack_bin/HYPHYMP:2: fullfill ==> fulfill, fulfil
    data/bioperl-run-1.7.3/debian/test_hack_bin/raxml:2: fullfill ==> fulfill, fulfil
    data/bioperl-run-1.7.3/.pc/kalign-input-via-piping.patch/lib/Bio/Tools/Run/Alignment/Kalign.pm:227: analysus ==> analysis
    data/bioperl-run-1.7.3/.pc/kalign-version-regex.patch/lib/Bio/Tools/Run/Alignment/Kalign.pm:227: analysus ==> analysis
    data/bioperl-run-1.7.3/.pc/skip_tests_for_phylip.patch/t/ProtPars.t:83: nd ==> and, 2nd
    data/bioperl-run-1.7.3/.pc/skip_tests_for_ncbi-blast+.patch/t/SABlastPlus.t:284: explict ==> explicit
    data/bioperl-run-1.7.3/.pc/skip_tests_for_soap.patch/t/AnalysisFactory_soap.t:31: existant ==> existent