    data/fastml-3.11/README:79: deafult ==> default
    data/fastml-3.11/README:83: diretory ==> directory
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:30: deafult ==> default
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:78: requiered ==> required
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:146: Ouputs ==> Outputs
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:807: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:808: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:808: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:814: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:815: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:815: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:819: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:820: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:820: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:824: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:825: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:825: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:832: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:833: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:833: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:837: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:838: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:838: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:839: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:842: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:843: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:843: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:847: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:848: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:848: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:854: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:855: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:855: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:859: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:860: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:860: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:861: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:864: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:865: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:865: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:869: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:870: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:870: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:878: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:879: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:879: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:882: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:883: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:883: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:891: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:892: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:892: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:896: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:897: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:897: ans ==> and
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:962: Plesae ==> Please
    data/fastml-3.11/www/fastml/FastML_Wrapper.pl:1841: beacuse ==> because
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:7: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:9: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:11: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:12: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:13: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:15: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:16: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:17: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:19: deafult ==> default
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:657: palce ==> place, palace
    data/fastml-3.11/www/fastml/IndelReconstruction_Wrapper.pl:661: palce ==> place, palace
    data/fastml-3.11/www/fastml/BuildRaxMLTree.pl:24: ans ==> and
    data/fastml-3.11/www/fastml/BuildRaxMLTree.pl:25: ans ==> and
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:46: selecton ==> selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:72: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:72: selecton ==> selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:116: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:119: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:120: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:121: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:204: occured ==> occurred
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:226: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:235: nWe ==> new
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:252: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:254: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:305: substitue ==> substitute
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:329: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/GENERAL_CONSTANTS.pm:338: nWe ==> new
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:10: receieves ==> receives
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:80: seperately ==> separately
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:82: hashs ==> hashes
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:83: messured ==> measured
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:87: refernce ==> reference
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:88: refernce ==> reference
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:102: therefor ==> therefore
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:135: formating ==> formatting
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:234: selecton ==> selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:279: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:296: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:297: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:352: inculdes ==> includes
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:355: inculdes ==> includes
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:355: seperate ==> separate
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:407: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:414: Selecton ==> Selection
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:450: realeased ==> released
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:470: realeased ==> released
    data/fastml-3.11/www/bioSequence_scripts_and_constants/BIOSEQUENCE_FUNCTIONS.pm:488: realeased ==> released
    data/fastml-3.11/libs/Makefile:3: becouse ==> because
    data/fastml-3.11/libs/phylogeny/jones.dat.q:23: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/jones.dat.q:53: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/jones.dat.q:96: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/nj.cpp:20: beggining ==> beginning
    data/fastml-3.11/libs/phylogeny/nj.cpp:20: separeted ==> separated
    data/fastml-3.11/libs/phylogeny/splitTreeUtil.cpp:62: allready ==> already, all ready
    data/fastml-3.11/libs/phylogeny/splitTreeUtil.cpp:91: splitted ==> split
    data/fastml-3.11/libs/phylogeny/fromInstructionFile.h:38: ALOCATE ==> ALLOCATE
    data/fastml-3.11/libs/phylogeny/fromInstructionFile.h:43: alocate ==> allocate
    data/fastml-3.11/libs/phylogeny/fastaFormat.h:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/fastaFormat.h:12: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateRateShiftJumps.cpp:18: ontainging ==> containing
    data/fastml-3.11/libs/phylogeny/simulateRateShiftJumps.cpp:135: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/simulateRateShiftJumps.cpp:144: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/phylipSequentialFormat.h:11: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipSequentialFormat.h:16: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/computeMarginalAlg.h:13: homogenous ==> homogeneous
    data/fastml-3.11/libs/phylogeny/datMatrixHolder.h:10: BUILD-IN ==> BUILT-IN
    data/fastml-3.11/libs/phylogeny/bblEMProportionalEB.h:46: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEMProportionalEB.h:46: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateTree.h:16: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/optGammaMixtureEM.h:9: improvment ==> improvement
    data/fastml-3.11/libs/phylogeny/bootstrap.h:20: treshold ==> threshold
    data/fastml-3.11/libs/phylogeny/bootstrap.h:21: treshold ==> threshold
    data/fastml-3.11/libs/phylogeny/bootstrap.h:40: concensus ==> consensus
    data/fastml-3.11/libs/phylogeny/optGammaMixtureLS.cpp:161: seperatly ==> separately
    data/fastml-3.11/libs/phylogeny/optGammaMixtureLS.cpp:161: untill ==> until
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.cpp:5: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.cpp:13: occures ==> occurs
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.cpp:50: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.cpp:97: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.cpp:136: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM2codon.h:45: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM2codon.h:45: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEMfixRoot.cpp:109: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEMfixRoot.cpp:109: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEMfixRoot.cpp:178: becaues ==> because
    data/fastml-3.11/libs/phylogeny/simulateTree.cpp:12: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateTree.cpp:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/wag.dat.q:23: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/Nni.cpp:26: swaping ==> swapping
    data/fastml-3.11/libs/phylogeny/optGammaMixtureLS.h:8: improvment ==> improvement
    data/fastml-3.11/libs/phylogeny/optGammaMixtureLS.h:237: prameters ==> parameters
    data/fastml-3.11/libs/phylogeny/treeUtil.cpp:125: doens't ==> doesn't
    data/fastml-3.11/libs/phylogeny/treeUtil.cpp:382: skipp ==> skip, skipped
    data/fastml-3.11/libs/phylogeny/maseFormat.cpp:7: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/maseFormat.cpp:8: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/maseFormat.cpp:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/maseFormat.cpp:66: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.h:5: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.h:13: occures ==> occurs
    data/fastml-3.11/libs/phylogeny/simulateWithDependence.h:46: nuber ==> number
    data/fastml-3.11/libs/phylogeny/fastStartTree.h:16: allTogether ==> altogether, all together
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.cpp:37: unkonwn ==> unknown
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.cpp:100: precent ==> percent, prescient
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.cpp:104: seqeunce ==> sequence
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.cpp:127: precent ==> percent, prescient
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.cpp:169: seqeunce ==> sequence
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.cpp:228: divisable ==> divisible
    data/fastml-3.11/libs/phylogeny/recognizeFormat.h:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.h:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateJumps.h:17: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/bblEM2USSRV.h:53: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM2USSRV.h:53: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM2USSRV.h:54: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM2USSRV.h:54: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/gammaUtilities.cpp:34: interations ==> iterations, interactions
    data/fastml-3.11/libs/phylogeny/gammaUtilities.cpp:114: ser ==> set
    data/fastml-3.11/libs/phylogeny/gammaUtilities.cpp:128: ser ==> set
    data/fastml-3.11/libs/phylogeny/gammaUtilities.cpp:129: ser ==> set
    data/fastml-3.11/libs/phylogeny/gammaUtilities.cpp:130: ser ==> set
    data/fastml-3.11/libs/phylogeny/phylipFormat.h:11: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipFormat.h:16: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/betaOmegaDistribution.cpp:17: initalization ==> initialization
    data/fastml-3.11/libs/phylogeny/betaOmegaDistribution.cpp:17: diffrence ==> difference
    data/fastml-3.11/libs/phylogeny/replacementModel.h:20: beacuse ==> because
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:22: orginal ==> original
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:29: orginal ==> original
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:74: allTogether ==> altogether, all together
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:89: allTogether ==> altogether, all together
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:105: allTogether ==> altogether, all together
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:131: allTogether ==> altogether, all together
    data/fastml-3.11/libs/phylogeny/fastStartTree.cpp:136: allTogether ==> altogether, all together
    data/fastml-3.11/libs/phylogeny/knownBugs:2: couse ==> course, cause
    data/fastml-3.11/libs/phylogeny/numRec.h:170: preforms ==> performs
    data/fastml-3.11/libs/phylogeny/numRec.h:419: retruns ==> returns
    data/fastml-3.11/libs/phylogeny/bblEMProportional.h:42: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEMProportional.h:42: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/Parameters.h:69: intgers ==> integers
    data/fastml-3.11/libs/phylogeny/Parameters.h:77: recieves ==> receives
    data/fastml-3.11/libs/phylogeny/Parameters.h:80: charachter ==> character
    data/fastml-3.11/libs/phylogeny/Parameters.h:111: follwing ==> following
    data/fastml-3.11/libs/phylogeny/Parameters.h:127: seperate ==> separate
    data/fastml-3.11/libs/phylogeny/Parameters.h:165: recieves ==> receives
    data/fastml-3.11/libs/phylogeny/Parameters.h:236: recieves ==> receives
    data/fastml-3.11/libs/phylogeny/sequence.cpp:116: implimentions ==> implementations
    data/fastml-3.11/libs/phylogeny/betaDistribution.cpp:22: initalization ==> initialization
    data/fastml-3.11/libs/phylogeny/betaDistribution.cpp:22: diffrence ==> difference
    data/fastml-3.11/libs/phylogeny/generalGammaDistribution.cpp:103: becuase ==> because
    data/fastml-3.11/libs/phylogeny/trivialAccelerator.h:31: retruns ==> returns
    data/fastml-3.11/libs/phylogeny/likeDistfixRoot.h:115: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/likeDistfixRoot.h:115: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/likeDistfixRoot.h:123: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/likeDistfixRoot.h:124: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/Makefile:82: requres ==> requires
    data/fastml-3.11/libs/phylogeny/NNiSep.cpp:59: swaping ==> swapping
    data/fastml-3.11/libs/phylogeny/tree.h:123: tollerance ==> tolerance
    data/fastml-3.11/libs/phylogeny/fromInstructionFile.cpp:391: inputed ==> inputted
    data/fastml-3.11/libs/phylogeny/someUtil.h:93: seperated ==> separated
    data/fastml-3.11/libs/phylogeny/someUtil.h:95: seperated ==> separated
    data/fastml-3.11/libs/phylogeny/someUtil.h:138: preserv ==> preserve
    data/fastml-3.11/libs/phylogeny/someUtil.h:139: cotains ==> contains
    data/fastml-3.11/libs/phylogeny/someUtil.h:154: threshhold ==> threshold
    data/fastml-3.11/libs/phylogeny/someUtil.h:158: threshhold ==> threshold
    data/fastml-3.11/libs/phylogeny/someUtil.h:161: seperator ==> separator
    data/fastml-3.11/libs/phylogeny/someUtil.h:170: seperater ==> separator
    data/fastml-3.11/libs/phylogeny/ssrvDistanceSeqs2Tree.h:43: homogenous ==> homogeneous
    data/fastml-3.11/libs/phylogeny/molphyFormat.cpp:6: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/molphyFormat.cpp:7: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/molphyFormat.cpp:11: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/molphyFormat.cpp:61: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/samplingSequences.cpp:158: begining ==> beginning
    data/fastml-3.11/libs/phylogeny/nucleotide.h:19: machanism ==> mechanism
    data/fastml-3.11/libs/phylogeny/nucleotide.h:21: machanism ==> mechanism
    data/fastml-3.11/libs/phylogeny/nucleotide.h:60: speical ==> special
    data/fastml-3.11/libs/phylogeny/nucleotide.h:78: acount ==> account
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.h:21: divisable ==> divisible
    data/fastml-3.11/libs/phylogeny/seqeuncesFilter.h:26: precent ==> percent, prescient
    data/fastml-3.11/libs/phylogeny/simulateCodonsJumps.cpp:95: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/simulateCodonsJumps.cpp:104: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/likelihoodComputation.h:108: homogenous ==> homogeneous
    data/fastml-3.11/libs/phylogeny/bootstrap.cpp:39: intializes ==> initializes
    data/fastml-3.11/libs/phylogeny/sequenceContainer.h:87: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.h:91: iterface ==> interface
    data/fastml-3.11/libs/phylogeny/sequenceContainer.h:96: iterface ==> interface
    data/fastml-3.11/libs/phylogeny/GamMixtureOptimizer.cpp:37: peformed ==> performed
    data/fastml-3.11/libs/phylogeny/readDatMatrix.cpp:67: priting ==> printing
    data/fastml-3.11/libs/phylogeny/readDatMatrix.cpp:209: alpah ==> alpha
    data/fastml-3.11/libs/phylogeny/bestAlphaManyTrees.cpp:112: SEPERATE ==> SEPARATE
    data/fastml-3.11/libs/phylogeny/amino.cpp:8: realy ==> really
    data/fastml-3.11/libs/phylogeny/amino.cpp:8: allocted ==> allocated
    data/fastml-3.11/libs/phylogeny/amino.cpp:8: dimentional ==> dimensional
    data/fastml-3.11/libs/phylogeny/amino.cpp:111: SWITHCED ==> SWITCHED
    data/fastml-3.11/libs/phylogeny/computeUpAlg.h:32: debuging ==> debugging
    data/fastml-3.11/libs/phylogeny/computeUpAlg.h:44: attemp ==> attempt
    data/fastml-3.11/libs/phylogeny/bblEMProprtional.cpp:75: becaues ==> because
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:307: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:388: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:489: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:489: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:489: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:490: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:491: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:493: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:506: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:506: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:506: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:507: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/sequenceContainer.cpp:508: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/jcDistance.h:36: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/jcDistance.h:38: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/getRandomWeights.h:13: substract ==> subtract
    data/fastml-3.11/libs/phylogeny/getRandomWeights.h:14: substract ==> subtract
    data/fastml-3.11/libs/phylogeny/codon.cpp:237: retruns ==> returns
    data/fastml-3.11/libs/phylogeny/codon.cpp:306: fron ==> from
    data/fastml-3.11/libs/phylogeny/codon.cpp:307: retruns ==> returns
    data/fastml-3.11/libs/phylogeny/codon.cpp:437: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:444: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:457: seperated ==> separated
    data/fastml-3.11/libs/phylogeny/codon.cpp:458: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:460: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:482: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:494: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:501: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codon.cpp:527: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/cmdline2EvolObjs.h:255: ment ==> meant
    data/fastml-3.11/libs/phylogeny/generalGammaDistributionLaguerre.cpp:21: numebr ==> number
    data/fastml-3.11/libs/phylogeny/getRandomWeights.cpp:22: swaped ==> swapped
    data/fastml-3.11/libs/phylogeny/nexusFormat.h:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/nexusFormat.h:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblLSProportionalEB.h:19: optimze ==> optimize
    data/fastml-3.11/libs/phylogeny/bblLSProportionalEB.h:19: seperatly ==> separately
    data/fastml-3.11/libs/phylogeny/molphyFormat.h:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/molphyFormat.h:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM2codon.cpp:115: becaues ==> because
    data/fastml-3.11/libs/phylogeny/suffStatComponent.h:11: gobal ==> global
    data/fastml-3.11/libs/phylogeny/split.h:61: asumed ==> assumed
    data/fastml-3.11/libs/phylogeny/dayhoff.dat.q:23: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/dayhoff.dat.q:52: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/dayhoff.dat.q:70: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/dayhoff.dat.q:70: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/ConversionUtils.cpp:22: lenght ==> length
    data/fastml-3.11/libs/phylogeny/ConversionUtils.cpp:27: lenght ==> length
    data/fastml-3.11/libs/phylogeny/ConversionUtils.cpp:31: lenght ==> length
    data/fastml-3.11/libs/phylogeny/fastaFormat.cpp:9: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/fastaFormat.cpp:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/fastaFormat.cpp:16: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/fastaFormat.cpp:60: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/nexusFormat.cpp:47: seqeunce ==> sequence
    data/fastml-3.11/libs/phylogeny/nexusFormat.cpp:50: begining ==> beginning
    data/fastml-3.11/libs/phylogeny/sequence.h:50: characer ==> character
    data/fastml-3.11/libs/phylogeny/clustalFormat.cpp:9: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/clustalFormat.cpp:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/clustalFormat.cpp:15: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/clustalFormat.cpp:89: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/clustalFormat.cpp:92: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codonUtils.cpp:9: divisable ==> divisible
    data/fastml-3.11/libs/phylogeny/codonUtils.cpp:11: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codonUtils.cpp:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/codonUtils.cpp:19: divisable ==> divisible
    data/fastml-3.11/libs/phylogeny/codonUtils.cpp:126: selecton ==> selection
    data/fastml-3.11/libs/phylogeny/codonUtils.cpp:138: differnt ==> different
    data/fastml-3.11/libs/phylogeny/NNiProp.cpp:36: swaping ==> swapping
    data/fastml-3.11/libs/phylogeny/simulateJumpsAbstract.h:33: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/split.cpp:71: actualy ==> actually
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:15: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:16: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:21: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:38: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:41: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:44: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:47: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:66: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:71: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/recognizeFormat.cpp:73: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/mixtureDistribution.h:5: occurance ==> occurrence
    data/fastml-3.11/libs/phylogeny/mixtureDistribution.h:7: probabilty ==> probability
    data/fastml-3.11/libs/phylogeny/mixtureDistribution.h:9: actuall ==> actually, actual
    data/fastml-3.11/libs/phylogeny/aaJC.h:33: worng ==> wrong, worn
    data/fastml-3.11/libs/phylogeny/bblEM2USSRV.cpp:113: becaues ==> because
    data/fastml-3.11/libs/phylogeny/phylipFormat.cpp:8: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipFormat.cpp:9: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipFormat.cpp:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipFormat.cpp:36: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipFormat.cpp:53: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipFormat.cpp:67: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/findRateOfGene.cpp:41: funtion ==> function
    data/fastml-3.11/libs/phylogeny/findRateOfGene.cpp:57: funtion ==> function
    data/fastml-3.11/libs/phylogeny/unObservableData.cpp:9: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/unObservableData.cpp:11: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/GLaguer.cpp:21: vecotrs ==> vectors
    data/fastml-3.11/libs/phylogeny/readTree.cpp:26: numnber ==> number
    data/fastml-3.11/libs/phylogeny/readTree.cpp:97: strucure ==> structure
    data/fastml-3.11/libs/phylogeny/readTree.cpp:111: beggining ==> beginning
    data/fastml-3.11/libs/phylogeny/fromCountTableComponentToDistancefixRoot.h:28: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/fromCountTableComponentToDistancefixRoot.h:28: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/geneticCodeHolder.h:10: BUILD-IN ==> BUILT-IN
    data/fastml-3.11/libs/phylogeny/simulateCodonsJumps.h:18: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/definitions.h:29: Contants ==> Constants, contents
    data/fastml-3.11/libs/phylogeny/evaluateCharacterFreq.cpp:99: charecters ==> characters
    data/fastml-3.11/libs/phylogeny/maseFormat.h:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/maseFormat.h:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/siteSpecificRateGL.h:34: atributes ==> attributes
    data/fastml-3.11/libs/phylogeny/bblEM.cpp:153: becaues ==> because
    data/fastml-3.11/libs/phylogeny/allTreesSeparateModel.cpp:50: seperate ==> separate
    data/fastml-3.11/libs/phylogeny/gammaUtilities.h:7: fot ==> for, fit, dot, rot, cot, got, tot, fog
    data/fastml-3.11/libs/phylogeny/chebyshevAccelerator.cpp:85: chosing ==> choosing
    data/fastml-3.11/libs/phylogeny/chebyshevAccelerator.cpp:115: probabilty ==> probability
    data/fastml-3.11/libs/phylogeny/chebyshevAccelerator.cpp:145: probabilty ==> probability
    data/fastml-3.11/libs/phylogeny/chebyshevAccelerator.cpp:169: probabilty ==> probability
    data/fastml-3.11/libs/phylogeny/doubleRep.h:92: ans ==> and
    data/fastml-3.11/libs/phylogeny/doubleRep.h:94: ans ==> and
    data/fastml-3.11/libs/phylogeny/doubleRep.h:104: ans ==> and
    data/fastml-3.11/libs/phylogeny/doubleRep.h:106: ans ==> and
    data/fastml-3.11/libs/phylogeny/siteSpecificRate.h:34: atributes ==> attributes
    data/fastml-3.11/libs/phylogeny/splitMap.h:11: occurences ==> occurrences
    data/fastml-3.11/libs/phylogeny/splitMap.h:13: occurence ==> occurrence
    data/fastml-3.11/libs/phylogeny/splitMap.h:24: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/splitMap.h:26: occurances ==> occurrences
    data/fastml-3.11/libs/phylogeny/likelihoodComputation.cpp:185: multipled ==> multiplied
    data/fastml-3.11/libs/phylogeny/phylipSequentialFormat.cpp:8: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipSequentialFormat.cpp:9: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipSequentialFormat.cpp:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/phylipSequentialFormat.cpp:57: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/simulateRateShiftJumps.h:18: occured ==> occurred
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:32: non-existant ==> non-existent
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:189: non-existant ==> non-existent
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:244: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:268: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:269: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:275: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:277: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:285: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/matrixUtils.cpp:286: dum ==> dumb
    data/fastml-3.11/libs/phylogeny/unObservableData.h:16: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/distanceBasedSeqs2Tree.h:107: homogenous ==> homogeneous
    data/fastml-3.11/libs/phylogeny/distanceBasedSeqs2Tree.h:139: homogenous ==> homogeneous
    data/fastml-3.11/libs/phylogeny/distanceBasedSeqs2Tree.h:175: homogenous ==> homogeneous
    data/fastml-3.11/libs/phylogeny/tree.cpp:438: therefor ==> therefore
    data/fastml-3.11/libs/phylogeny/tree.cpp:625: properies ==> properties
    data/fastml-3.11/libs/phylogeny/tree.cpp:625: previos ==> previous
    data/fastml-3.11/libs/phylogeny/tree.cpp:1115: refering ==> referring
    data/fastml-3.11/libs/phylogeny/tree.cpp:1341: tollerance ==> tolerance
    data/fastml-3.11/libs/phylogeny/bblEMProportionalEB.cpp:123: becaues ==> because
    data/fastml-3.11/libs/phylogeny/ussrvModel.h:14: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/ussrvModel.h:14: shold ==> should, hold, sold
    data/fastml-3.11/libs/phylogeny/clustalFormat.h:10: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/clustalFormat.h:13: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/suffStatGammaMixture.h:5: neccessary ==> necessary
    data/fastml-3.11/libs/phylogeny/njConstrain.cpp:24: cant ==> can't
    data/fastml-3.11/libs/phylogeny/njConstrain.cpp:33: cant ==> can't
    data/fastml-3.11/libs/phylogeny/njConstrain.cpp:34: cant ==> can't
    data/fastml-3.11/libs/phylogeny/njConstrain.cpp:92: skiped ==> skipped, skyped
    data/fastml-3.11/libs/phylogeny/njConstrain.cpp:102: cant ==> can't
    data/fastml-3.11/libs/phylogeny/njConstrain.cpp:103: cant ==> can't
    data/fastml-3.11/libs/phylogeny/bblEMfixRoot.h:79: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEMfixRoot.h:79: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/replacementModelSSRV.h:63: distibution ==> distribution
    data/fastml-3.11/libs/phylogeny/ussrvModel.cpp:90: meaningfull ==> meaningful
    data/fastml-3.11/libs/phylogeny/ussrvModel.cpp:97: devide ==> divide
    data/fastml-3.11/libs/phylogeny/ussrvModel.cpp:98: devide ==> divide
    data/fastml-3.11/libs/phylogeny/bblEM.h:49: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/bblEM.h:49: alph ==> alpha
    data/fastml-3.11/libs/phylogeny/mtREV24.dat.q:23: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:21: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:30: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:44: symetric ==> symmetric
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:54: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:57: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:139: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:140: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:179: symetrical ==> symmetrical
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:233: insted ==> instead
    data/fastml-3.11/libs/phylogeny/fromQtoPt.cpp:292: priting ==> printing
    data/fastml-3.11/libs/phylogeny/evolObjs.args:30: IMPLIMENTED ==> IMPLEMENTED
    data/fastml-3.11/libs/phylogeny/evolObjs.args:94: Numver ==> Number
    data/fastml-3.11/libs/phylogeny/evolObjs.args:94: interations ==> iterations, interactions
    data/fastml-3.11/libs/phylogeny/#Makefile#:82: requres ==> requires
    data/fastml-3.11/libs/phylogeny/likeDist.cpp:212: devide ==> divide
    data/fastml-3.11/libs/phylogeny/numRec.cpp:37: indentity ==> identity
    data/fastml-3.11/libs/phylogeny/numRec.cpp:148: cahnges ==> changes
    data/fastml-3.11/libs/phylogeny/numRec.cpp:181: comute ==> commute, compute
    data/fastml-3.11/libs/phylogeny/numRec.cpp:183: createing ==> creating
    data/fastml-3.11/libs/phylogeny/numRec.cpp:191: elemnts ==> elements
    data/fastml-3.11/libs/phylogeny/numRec.cpp:462: fo ==> of, for
    data/fastml-3.11/libs/phylogeny/numRec.cpp:474: fo ==> of, for
    data/fastml-3.11/libs/phylogeny/likeDistfixRoot.cpp:212: devide ==> divide
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:14: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:15: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:20: secound ==> second
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:20: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:21: secound ==> second
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:21: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:39: secound ==> second
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:42: secound ==> second
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:42: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:55: compatability ==> compatibility
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:68: compatability ==> compatibility
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.cpp:80: compatability ==> compatibility
    data/fastml-3.11/libs/phylogeny/tests/split_test.out.standard:27: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:2: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:12: secound ==> second
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:12: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:28: secound ==> second
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:48: compatability ==> compatibility
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:50: compatability ==> compatibility
    data/fastml-3.11/libs/phylogeny/tests/bootstrap_test.out.standard:52: compatability ==> compatibility
    data/fastml-3.11/libs/phylogeny/tests/split_test.cpp:82: constractor ==> constructor
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/jones.dat:25: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/jones.dat:61: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/jones.dat:109: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/wag.dat:25: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/dayhoff.dat:25: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/dayhoff.dat:61: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/dayhoff.dat:81: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/dayhoff.dat:81: Ser ==> Set
    data/fastml-3.11/libs/phylogeny/replacementMatrixSource/mtREV24.dat:26: Ser ==> Set
    data/fastml-3.11/programs/Makefile:3: becouse ==> because
    data/fastml-3.11/programs/gainLoss/gainLossOptions.h:46: charachter ==> character
    data/fastml-3.11/programs/gainLoss/gainLossOptions.h:243: ture ==> true
    data/fastml-3.11/programs/gainLoss/gainLossModel.cpp:22: preperation ==> preparation
    data/fastml-3.11/programs/gainLoss/gainLoss.vcproj:243: chages ==> changes, charges
    data/fastml-3.11/programs/gainLoss/junk.txt:216: CHANING ==> CHAINING, CHANGING
    data/fastml-3.11/programs/gainLoss/junk.txt:223: homogenoues ==> homogeneous
    data/fastml-3.11/programs/gainLoss/gainLossUtils.h:129: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/simulateOnePos.cpp:217: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/simulateOnePos.cpp:217: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/simulateOnePos.cpp:217: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/simulateOnePos.cpp:218: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/likelihoodClasses.suffStat.computeUp.computeDown.txt:22: actaully ==> actually
    data/fastml-3.11/programs/gainLoss/likelihoodClasses.suffStat.computeUp.computeDown.txt:60: parial ==> partial
    data/fastml-3.11/programs/gainLoss/likelihoodClasses.suffStat.computeUp.computeDown.txt:70: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/likelihoodClasses.suffStat.computeUp.computeDown.txt:70: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.oldFunc_moved2rate4siteGL.txt:292: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.oldFunc_moved2rate4siteGL.txt:293: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/RootFreq.and.Reversibility.MixModels.txt:6: alse ==> also, else, false
    data/fastml-3.11/programs/gainLoss/RootFreq.and.Reversibility.MixModels.txt:15: seperated ==> separated
    data/fastml-3.11/programs/gainLoss/gainLossOptions.cpp:21: consistancy ==> consistency
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModelVV.cpp:75: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModelVV.cpp:191: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModelVV.cpp:439: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModelVV.cpp:439: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModelVV.cpp:439: improvment ==> improvement
    data/fastml-3.11/programs/gainLoss/bblLS.h:36: optimze ==> optimize
    data/fastml-3.11/programs/gainLoss/bblLS.h:36: seperatly ==> separately
    data/fastml-3.11/programs/gainLoss/sankoffReconstructGL.cpp:229: intialize ==> initialize
    data/fastml-3.11/programs/gainLoss/sankoffReconstructGL.cpp:312: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/sankoffReconstructGL.cpp:326: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:75: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:124: eiter ==> either
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:148: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:148: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:283: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:315: was't ==> wasn't
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:316: was't ==> wasn't
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:357: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:414: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/optimizeGainLossModel.cpp:534: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:89: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:98: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:98: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:173: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:182: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:182: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:278: Standatd ==> Standard
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:499: addtional ==> additional
    data/fastml-3.11/programs/gainLoss/gainLossOptimizer.cpp:635: addtional ==> additional
    data/fastml-3.11/programs/gainLoss/gainLoss.h:186: befor ==> before
    data/fastml-3.11/programs/gainLoss/classesInherit.costurs.clone.assignment.txt:19: refering ==> referring
    data/fastml-3.11/programs/gainLoss/LpostPerCat.PerSp.txt:7: sperate ==> separate
    data/fastml-3.11/programs/gainLoss/LOG chages.txt:24: imcompatible ==> incompatible
    data/fastml-3.11/programs/gainLoss/LOG chages.txt:25: previousL ==> previously
    data/fastml-3.11/programs/gainLoss/computeCountsGL.cpp:93: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/computeCountsGL.cpp:214: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/ancestralReconstructStates.cpp:184: acount ==> account
    data/fastml-3.11/programs/gainLoss/ancestralReconstructStates.cpp:184: probabilty ==> probability
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:425: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:427: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:446: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:509: Belove ==> Below, beloved
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:522: Belove ==> Below, beloved
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:555: Belove ==> Below, beloved
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:566: Belove ==> Below, beloved
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:660: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:713: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:762: didnt ==> didn't
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:1156: preformed ==> performed
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:1281: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:2323: withour ==> without, with our
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:2499: withour ==> without, with our
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:2523: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:2573: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:2627: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3100: orginal ==> original
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3100: orginal ==> original
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3148: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3151: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3173: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3224: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3257: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3260: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3261: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3273: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3289: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3304: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3351: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3354: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3406: structur ==> structure
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:3552: parmeters ==> parameters
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:4165: OTU ==> OUT
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:4818: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5016: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5019: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5045: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5056: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5245: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5247: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5285: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5511: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5514: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5525: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5549: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5550: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5644: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5788: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5791: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5817: alph ==> alpha
    data/fastml-3.11/programs/gainLoss/gainLoss.cpp:5828: alph ==> alpha
    data/fastml-3.11/programs/fastml/sequenceDataDiff.h:31: conatiners ==> containers
    data/fastml-3.11/programs/fastml/bbEvaluateSpecificAV.cpp:46: alph ==> alpha
    data/fastml-3.11/programs/fastml/bbEvaluateSpecificAV.cpp:57: childs ==> children, child's
    data/fastml-3.11/programs/fastml/bbAlg.cpp:27: probabilty ==> probability
    data/fastml-3.11/programs/fastml/bbAlg.cpp:47: afetr ==> after
    data/fastml-3.11/programs/fastml/bbAlg.cpp:223: ouput ==> output
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:38: probabilty ==> probability
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:172: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:175: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:177: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:177: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:178: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:179: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:180: pres ==> press
    data/fastml-3.11/programs/fastml/computeMarginalReconstruction.cpp:181: pres ==> press
    data/fastml-3.11/programs/fastml/bbComputeDownAlg.cpp:75: alocating ==> allocating
    data/fastml-3.11/programs/fastml/bbComputeDownAlg.cpp:97: alocating ==> allocating
    data/fastml-3.11/programs/fastml/bbfindBestAVDynProg.cpp:30: alph ==> alpha
    data/fastml-3.11/programs/fastml/bbfindBestAVDynProg.cpp:70: alph ==> alpha
    data/fastml-3.11/programs/fastml/mainbb.h:28: replacment ==> replacement
    data/fastml-3.11/programs/fastml/mainbb.cpp:358: probablistic ==> probabilistic
    data/fastml-3.11/programs/fastml/mainbb.cpp:554: alph ==> alpha
    data/fastml-3.11/programs/fastml/mainbb.cpp:557: alph ==> alpha
    data/fastml-3.11/programs/fastml/bb_options_list.h:28: Controling ==> Controlling
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:69: alph ==> alpha
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:71: alph ==> alpha
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:396: lenght ==> length
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:400: coordinats ==> coordinates
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:401: colomns ==> columns
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:402: colomns ==> columns
    data/fastml-3.11/programs/indelCoder/indelCoder.cpp:403: colomns ==> columns
    data/fastml-3.11/programs/indelCoder/indelCoderOptions.cpp:5: consistancy ==> consistency
    data/fastml-3.11/programs/indelCoder/indelCoderOptions.h:34: ajust ==> adjust
    data/fastml-3.11/programs/indelCoder/character.cpp:36: coordinats ==> coordinates
    data/fastml-3.11/programs/indelCoder/character.cpp:37: colomns ==> columns
    data/fastml-3.11/programs/indelCoder/character.cpp:38: colomns ==> columns
    data/fastml-3.11/programs/indelCoder/character.cpp:39: colomns ==> columns
    data/fastml-3.11/debian/fastml.1:63: Controling ==> Controlling
    data/fastml-3.11/debian/patches/spelling.patch:11: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:15: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:26: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:35: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:38: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:49: necesary ==> necessary
    data/fastml-3.11/debian/patches/spelling.patch:60: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:69: Treshold ==> Threshold
    data/fastml-3.11/debian/patches/spelling.patch:80: seperate ==> separate
    data/fastml-3.11/debian/patches/spelling.patch:91: seperatly ==> separately
    data/fastml-3.11/debian/patches/spelling.patch:102: homogenous ==> homogeneous
    data/fastml-3.11/debian/patches/spelling.patch:106: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/likeDist.cpp:148: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/likeDist.cpp:151: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/likeDist.cpp:212: devide ==> divide
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:37: indentity ==> identity
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:137: necesary ==> necessary
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:148: cahnges ==> changes
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:181: comute ==> commute, compute
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:183: createing ==> creating
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:191: elemnts ==> elements
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:462: fo ==> of, for
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/numRec.cpp:474: fo ==> of, for
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/likeDistfixRoot.cpp:148: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/likeDistfixRoot.cpp:151: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/libs/phylogeny/likeDistfixRoot.cpp:212: devide ==> divide
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/mainbb.cpp:101: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/mainbb.cpp:251: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/mainbb.cpp:253: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/mainbb.cpp:358: probablistic ==> probabilistic
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/mainbb.cpp:554: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/mainbb.cpp:557: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/bb_options_list.h:12: homogenous ==> homogeneous
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/bb_options_list.h:28: Controling ==> Controlling
    data/fastml-3.11/.pc/spelling.patch/programs/fastml/bb_options_list.h:39: Treshold ==> Threshold
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:425: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:427: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:446: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:509: Belove ==> Below, beloved
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:522: Belove ==> Below, beloved
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:555: Belove ==> Below, beloved
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:566: Belove ==> Below, beloved
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:660: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:713: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:762: didnt ==> didn't
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:1156: preformed ==> performed
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:1281: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:2323: withour ==> without, with our
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:2499: withour ==> without, with our
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:2523: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:2573: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:2627: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3100: orginal ==> original
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3100: orginal ==> original
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3148: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3151: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3173: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3224: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3257: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3260: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3261: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3273: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3289: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3304: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3351: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3354: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3406: structur ==> structure
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:3552: parmeters ==> parameters
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:4165: OTU ==> OUT
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:4528: seperatly ==> separately
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:4818: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5016: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5019: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5045: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5056: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5245: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5247: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5285: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5511: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5514: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5525: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5549: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5550: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5644: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5788: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5791: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5817: alph ==> alpha
    data/fastml-3.11/.pc/spelling.patch/programs/gainLoss/gainLoss.cpp:5828: alph ==> alpha